Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245513	Braf	Braf transforming gene	6	6 15.5 cM	109880
Gene Ontology	intracellular signaling cascade | receptor signaling protein activity | signal transduction
Human Homolog	BRAF[v-raf murine sarcoma viral oncogene homolog B1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 56 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC TTGGATTTTA (3) 3.3 0.0033 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture TTGGATTTTA (3) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture AGGTGTACAG (2) 2.3 0.0023 P8 GC+SHH+1d culture ATTAGGCATA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTGGATTTTA (3) 2.3 0.0023 P8 GC+SHH+1d culture CTTTCTATTT 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 P1 cortex CCTTTAATCC (355) 154.5 0.1545 P1 cortex TTGGATTTTA (3) 4.5 0.0045 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina TTGGATTTTA (3) 3.8 0.0038 E12.5 retina AGGTGTACAG (2) 1.9 0.0019 E12.5 retina CCTTTTATCC (8) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina TTGGATTTTA (3) 9.1 0.0091 E14.5 retina AGGTGTACAG (2) 1.8 0.0018 E14.5 retina ATTAGGCATA (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E16.5 retina CCTTTTATCC (8) 5.4 0.0054 E16.5 retina TTGGATTTTA (3) 3.6 0.0036 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina TTGGATTTTA (3) 9.1 0.0091 E18.5 retina ATTAGGCATA (2) 1.8 0.0018 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina TTGGATTTTA (3) 3.9 0.0039 P0.5 retina AGGTGTACAG (2) 2 0.002 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina CTTTCTATTT 3.5 0.0035 P2.5 retina AGGTGTACAG (2) 1.8 0.0018 P2.5 retina TTGGATTTTA (3) 1.8 0.0018 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina TTGGATTTTA (3) 4 0.004 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCTTTTATCC (8) 1.7 0.0017 P6.5 retina TTGGATTTTA (3) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CTTTCTATTT 3.7 0.0037 P10.5 crx- retina AGGTGTACAG (2) 1.9 0.0019 P10.5 crx- retina ATTAGGCATA (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina AGGTGTACAG (2) 1.9 0.0019 P10.5 crx+ retina CTTTCTATTT 1.9 0.0019 P10.5 crx+ retina TTGGATTTTA (3) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 Adult retinal CCTTTTATCC (8) 1.9 0.0019 Adult retinal CTTTCTATTT 1.9 0.0019 ONL CCTTTAATCC (355) 84.3 0.0843 ONL CCTTTTATCC (8) 3.8 0.0038 ONL TTGGATTTTA (3) 3.8 0.0038 ONL AGGTGTACAG (2) 1.9 0.0019