Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.245522	D5Wsu152e	DNA segment, Chr 5, Wayne State University 152, expressed	5	5 51.0 cM	28022
Mm.245522	D5Ertd236e	DNA segment, Chr 5, ERATO Doi 236, expressed	5	5 51.0 cM	52247
Mm.245522	AU017193	expressed sequence AU017193	5		100798
Mm.245522	A130069E23Rik	RIKEN cDNA A130069E23 gene	5		320883
Mm.245522	AL118186	expressed sequence AL118186	5		404570
Mm.245522	E330009E22Rik	RIKEN cDNA E330009E22 gene	5		320567
Mm.245522	Ankrd17	ankyrin repeat domain 17	5		81702
Gene Ontology	cellular_component unknown | endoderm development | molecular_function unknown
Human Homolog	ANKRD17[ankyrin repeat domain 17]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 170 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GTGGCGCACG (61) 13.1 0.0131 P8 Cb GC AAGCACTGTG (10) 3.3 0.0033 P8 Cb GC ATATGAAAAT (8) 3.3 0.0033 P8 Cb GC CTTCTGTTCC (10) 3.3 0.0033 P8 Cb GC AATAAACTCT (9) 1.6 0.0016 P8 Cb GC AATTTAAAAC (11) 1.6 0.0016 P8 Cb GC AATTTAAGTC (7) 1.6 0.0016 P8 Cb GC TGAGATATGT (9) 1.6 0.0016 P8 Cb GC TTGCCTTCCC (9) 1.6 0.0016 Cb medulloblastoma AATTTAAAAC (11) 16.2 0.0162 Cb medulloblastoma GTGGCGCACG (61) 6.9 0.0069 Cb medulloblastoma TGAGATATGT (9) 6.9 0.0069 Cb medulloblastoma AAGCACTGTG (10) 2.3 0.0023 Cb medulloblastoma CCAGCCTTCA (15) 2.3 0.0023 Cb medulloblastoma GTAAAAGAAA (9) 2.3 0.0023 Cb medulloblastoma TTGCCTTCCC (9) 2.3 0.0023 P8 GC+1d culture CTTCTGTTCC (10) 6.8 0.0068 P8 GC+1d culture GTGGCGCACG (61) 6.8 0.0068 P8 GC+1d culture ATATGAAAAT (8) 5.7 0.0057 P8 GC+1d culture TTGCCTTCCC (9) 5.7 0.0057 P8 GC+1d culture AATAAACTCT (9) 4.6 0.0046 P8 GC+1d culture AAGCACTGTG (10) 3.4 0.0034 P8 GC+1d culture CAGTTTTCCC (8) 3.4 0.0034 P8 GC+1d culture CCAGCCTTCA (15) 2.3 0.0023 P8 GC+1d culture AATTTAAAAC (11) 1.1 0.0011 P8 GC+1d culture TGAGATATGT (9) 1.1 0.0011 P8 GC+1d culture TTTGGTGTTT (13) 1.1 0.0011 P8 GC+SHH+1d culture ATATGAAAAT (8) 10.5 0.0105 P8 GC+SHH+1d culture CTTCTGTTCC (10) 8.2 0.0082 P8 GC+SHH+1d culture AATAAACTCT (9) 4.7 0.0047 P8 GC+SHH+1d culture CCAGCCTTCA (15) 4.7 0.0047 P8 GC+SHH+1d culture TGAGATATGT (9) 4.7 0.0047 P8 GC+SHH+1d culture AAGCACTGTG (10) 2.3 0.0023 P8 GC+SHH+1d culture GCAGCAGTCA (8) 2.3 0.0023 P8 GC+SHH+1d culture GTGGCGCACG (61) 2.3 0.0023 P8 GC+SHH+1d culture TTGCCTTCCC (9) 2.3 0.0023 P8 GC+SHH+1d culture AACAGTGTGC (10) 1.2 0.0012 P8 GC+SHH+1d culture AATTTAAGTC (7) 1.2 0.0012 3T3 fibroblasts GTGGCGCACG (61) 63.1 0.0631 3T3 fibroblasts TTGCCTTCCC (9) 21 0.021 3T3 fibroblasts AAGCACTGTG (10) 10.5 0.0105 3T3 fibroblasts CACACACATC (12) 3.5 0.0035 E15 cortex GTGGCGCACG (61) 113.8 0.1138 E15 cortex AAGCACTGTG (10) 4.9 0.0049 E15 cortex AATAAACTCT (9) 4.9 0.0049 E15 cortex CTTCTGTTCC (10) 4.9 0.0049 P1 cortex GTGGCGCACG (61) 18.2 0.0182 P1 cortex AAGCACTGTG (10) 4.5 0.0045 P1 cortex CAGTTTTCCC (8) 4.5 0.0045 P1 cortex CTTCTGTTCC (10) 4.5 0.0045 P1 cortex TGAGATATGT (9) 4.5 0.0045 P1 cortex TTGCCTTCCC (9) 4.5 0.0045 Hypothalamus CTTCTGTTCC (10) 5.4 0.0054 Hypothalamus TTGCCTTCCC (9) 5.4 0.0054 Hypothalamus CCAGCCTTCA (15) 3.6 0.0036 Hypothalamus GTGGCGCACG (61) 3.6 0.0036 Hypothalamus TGAGATATGT (9) 3.6 0.0036 Hypothalamus ATATGAAAAT (8) 1.8 0.0018 E12.5 retina GTGGCGCACG (61) 11.3 0.0113 E12.5 retina TGAGATATGT (9) 7.5 0.0075 E12.5 retina TTGCCTTCCC (9) 7.5 0.0075 E12.5 retina AAGCACTGTG (10) 3.8 0.0038 E12.5 retina ATATGAAAAT (8) 3.8 0.0038 E12.5 retina AACAGTGTGC (10) 1.9 0.0019 E12.5 retina CCAGCCTTCA (15) 1.9 0.0019 E12.5 retina CTTCTGTTCC (10) 1.9 0.0019 E12.5 retina GTAAAAGAAA (9) 1.9 0.0019 E14.5 retina GTGGCGCACG (61) 29.2 0.0292 E14.5 retina TTGCCTTCCC (9) 7.3 0.0073 E14.5 retina ATATGAAAAT (8) 5.5 0.0055 E14.5 retina CTTCTGTTCC (10) 5.5 0.0055 E14.5 retina TGAGATATGT (9) 3.6 0.0036 E14.5 retina CCAGCCTTCA (15) 1.8 0.0018 E16.5 retina GTGGCGCACG (61) 25.4 0.0254 E16.5 retina CTTCTGTTCC (10) 5.4 0.0054 E16.5 retina TTGCCTTCCC (9) 5.4 0.0054 E16.5 retina ATATGAAAAT (8) 3.6 0.0036 E16.5 retina TGAGATATGT (9) 3.6 0.0036 E16.5 retina CCAGCCTTCA (15) 1.8 0.0018 E18.5 retina GTGGCGCACG (61) 10.9 0.0109 E18.5 retina TGAGATATGT (9) 5.5 0.0055 E18.5 retina AAGCACTGTG (10) 3.6 0.0036 E18.5 retina GGACTTTCCT (10) 3.6 0.0036 E18.5 retina GTTCTAGAAG (7) 3.6 0.0036 E18.5 retina AATAAACTCT (9) 1.8 0.0018 E18.5 retina CCAGCCTTCA (15) 1.8 0.0018 E18.5 retina TTGCCTTCCC (9) 1.8 0.0018 P0.5 retina GTGGCGCACG (61) 25.5 0.0255 P0.5 retina TTGCCTTCCC (9) 15.7 0.0157 P0.5 retina CTTCTGTTCC (10) 9.8 0.0098 P0.5 retina TGAGATATGT (9) 9.8 0.0098 P0.5 retina AATAAACTCT (9) 3.9 0.0039 P0.5 retina CAGTTTTCCC (8) 2 0.002 P0.5 retina CCAGCCTTCA (15) 2 0.002 P0.5 retina GTAAAAGAAA (9) 2 0.002 P0.5 retina TTCATCAGCA (11) 2 0.002 P2.5 retina GTGGCGCACG (61) 17.6 0.0176 P2.5 retina ATATGAAAAT (8) 10.6 0.0106 P2.5 retina TTGCCTTCCC (9) 7 0.007 P2.5 retina AATAAACTCT (9) 5.3 0.0053 P2.5 retina CCAGCCTTCA (15) 3.5 0.0035 P2.5 retina CTTCTGTTCC (10) 3.5 0.0035 P2.5 retina TGAGATATGT (9) 3.5 0.0035 P2.5 retina AATTTAAGTC (7) 1.8 0.0018 P4.5 retina GTGGCGCACG (61) 17.8 0.0178 P4.5 retina CCAGCCTTCA (15) 9.9 0.0099 P4.5 retina ATATGAAAAT (8) 5.9 0.0059 P4.5 retina TGAGATATGT (9) 4 0.004 P4.5 retina AAGCACTGTG (10) 2 0.002 P4.5 retina CTTCTGTTCC (10) 2 0.002 P4.5 retina GTAAAAGAAA (9) 2 0.002 P4.5 retina GTTCTAGAAG (7) 2 0.002 P4.5 retina TTGCCTTCCC (9) 2 0.002 P6.5 retina GTGGCGCACG (61) 38.3 0.0383 P6.5 retina CCAGCCTTCA (15) 8.3 0.0083 P6.5 retina TTTGGTGTTT (13) 8.3 0.0083 P6.5 retina ATATGAAAAT (8) 5 0.005 P6.5 retina CTTCTGTTCC (10) 5 0.005 P6.5 retina TGAGATATGT (9) 5 0.005 P6.5 retina TTGCCTTCCC (9) 3.3 0.0033 P6.5 retina AACCAGCTTG (7) 1.7 0.0017 P6.5 retina AAGCACTGTG (10) 1.7 0.0017 P6.5 retina AATTTAAAAC (11) 1.7 0.0017 P6.5 retina GCAGCAGTCA (8) 1.7 0.0017 P6.5 retina GGACTTTCCT (10) 1.7 0.0017 P6.5 retina TTCATCAGCA (11) 1.7 0.0017 P10.5 crx- retina AAGCACTGTG (10) 14.9 0.0149 P10.5 crx- retina GTGGCGCACG (61) 13 0.013 P10.5 crx- retina TTGCCTTCCC (9) 7.4 0.0074 P10.5 crx- retina ATATGAAAAT (8) 3.7 0.0037 P10.5 crx- retina TGAGATATGT (9) 3.7 0.0037 P10.5 crx- retina AAACTGAAAG (13) 1.9 0.0019 P10.5 crx- retina AATTTAAAAC (11) 1.9 0.0019 P10.5 crx- retina CCAGCCTTCA (15) 1.9 0.0019 P10.5 crx- retina GCAGCAGTCA (8) 1.9 0.0019 P10.5 crx- retina GTTCTAGAAG (7) 1.9 0.0019 P10.5 crx- retina TTTGGTGTTT (13) 1.9 0.0019 P10.5 crx+ retina GTGGCGCACG (61) 32.7 0.0327 P10.5 crx+ retina AATTTAAAAC (11) 5.8 0.0058 P10.5 crx+ retina AAGCACTGTG (10) 3.8 0.0038 P10.5 crx+ retina CCAGCCTTCA (15) 3.8 0.0038 P10.5 crx+ retina CTTCTGTTCC (10) 3.8 0.0038 P10.5 crx+ retina AACAGTGTGC (10) 1.9 0.0019 P10.5 crx+ retina AACCAGCTTG (7) 1.9 0.0019 P10.5 crx+ retina AACCCAGCTT (8) 1.9 0.0019 P10.5 crx+ retina AATAAACTCT (9) 1.9 0.0019 P10.5 crx+ retina CACACACATC (12) 1.9 0.0019 P10.5 crx+ retina GCAGCAGTCA (8) 1.9 0.0019 P10.5 crx+ retina GTTCTAGAAG (7) 1.9 0.0019 P10.5 crx+ retina TTGCCTTCCC (9) 1.9 0.0019 Adult retinal GTGGCGCACG (61) 22.2 0.0222 Adult retinal TTGCCTTCCC (9) 7.4 0.0074 Adult retinal ATATGAAAAT (8) 5.6 0.0056 Adult retinal AACCCAGCTT (8) 3.7 0.0037 Adult retinal TTTGGTGTTT (13) 3.7 0.0037 Adult retinal AAACTGAAAG (13) 1.9 0.0019 Adult retinal AATTTAAAAC (11) 1.9 0.0019 Adult retinal CCAGCCTTCA (15) 1.9 0.0019 Adult retinal GAGCAGACCC (9) 1.9 0.0019 Adult retinal TGAGATATGT (9) 1.9 0.0019 Adult retinal TTCATCAGCA (11) 1.9 0.0019 ONL GTGGCGCACG (61) 23 0.023 ONL AACCCAGCTT (8) 7.7 0.0077 ONL ATATGAAAAT (8) 3.8 0.0038 ONL AAACTGAAAG (13) 1.9 0.0019 ONL AACCAGCTTG (7) 1.9 0.0019 ONL AAGCACTGTG (10) 1.9 0.0019 ONL CACACACATC (12) 1.9 0.0019 ONL GGACTTTCCT (10) 1.9 0.0019 ONL TGAGATATGT (9) 1.9 0.0019