Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246108
A230048O21Rik
RIKEN cDNA A230048O21 gene
15
320959
Mm.246108
0910001A06Rik
RIKEN cDNA 0910001A06 gene
15
223601
Human Homolog
FAM49B[family with sequence similarity 49, member B]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTTAAGAATG
(
2
)
4.9
0.0049
P8 Cb GC
CATACGTAAT
(
2
)
1.6
0.0016
P8 Cb GC
TGCAGCCAAA
(
2
)
1.6
0.0016
Cb medulloblastoma
AGAAAAGTAT
(
2
)
9.2
0.0092
Cb medulloblastoma
TTTAAGAATG
(
2
)
6.9
0.0069
Cb medulloblastoma
CATACGTAAT
(
2
)
2.3
0.0023
P8 GC+1d culture
TTTAAGAATG
(
2
)
3.4
0.0034
P8 GC+1d culture
AGAAAAGTAT
(
2
)
1.1
0.0011
P8 GC+1d culture
CAGGAGAAGC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TTTAAGAATG
(
2
)
5.9
0.0059
P8 GC+SHH+1d culture
AGAAAAGTAT
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGCAGCCAAA
(
2
)
1.2
0.0012
P1 cortex
AGAAAAGTAT
(
2
)
18.2
0.0182
P1 cortex
CACAGACCTT
(
3
)
4.5
0.0045
Hypothalamus
AGAAAAGTAT
(
2
)
9.1
0.0091
Hypothalamus
TTTAAGAATG
(
2
)
7.2
0.0072
Hypothalamus
CAGGAGAAGC
(
2
)
1.8
0.0018
Hypothalamus
CATACGTAAT
(
2
)
1.8
0.0018
Hypothalamus
TGCAGCCAAA
(
2
)
1.8
0.0018
E12.5 retina
TTTAAGAATG
(
2
)
7.5
0.0075
E14.5 retina
AGAAAAGTAT
(
2
)
1.8
0.0018
E14.5 retina
TTTAAGAATG
(
2
)
1.8
0.0018
E16.5 retina
TTTAAGAATG
(
2
)
10.9
0.0109
E16.5 retina
AGAAAAGTAT
(
2
)
1.8
0.0018
E16.5 retina
CACAGACCTT
(
3
)
1.8
0.0018
E16.5 retina
CATACGTAAT
(
2
)
1.8
0.0018
E16.5 retina
TGCAGCCAAA
(
2
)
1.8
0.0018
E18.5 retina
AGAAAAGTAT
(
2
)
1.8
0.0018
E18.5 retina
CATACGTAAT
(
2
)
1.8
0.0018
E18.5 retina
TCTTATTCTT
(
2
)
1.8
0.0018
E18.5 retina
TTTAAGAATG
(
2
)
1.8
0.0018
P0.5 retina
TTTAAGAATG
(
2
)
7.9
0.0079
P0.5 retina
TCTTATTCTT
(
2
)
2
0.002
P2.5 retina
TTTAAGAATG
(
2
)
5.3
0.0053
P2.5 retina
AGAAAAGTAT
(
2
)
3.5
0.0035
P2.5 retina
CAGGAGAAGC
(
2
)
1.8
0.0018
P2.5 retina
CATACGTAAT
(
2
)
1.8
0.0018
P2.5 retina
TCTTATTCTT
(
2
)
1.8
0.0018
P4.5 retina
CACAGACCTT
(
3
)
2
0.002
P6.5 retina
AGAAAAGTAT
(
2
)
10
0.01
P6.5 retina
TTTAAGAATG
(
2
)
8.3
0.0083
P6.5 retina
CAGGAGAAGC
(
2
)
1.7
0.0017
P10.5 crx- retina
AGAAAAGTAT
(
2
)
1.9
0.0019
P10.5 crx+ retina
AGAAAAGTAT
(
2
)
5.8
0.0058
P10.5 crx+ retina
TTTAAGAATG
(
2
)
5.8
0.0058
P10.5 crx+ retina
CAGGAGAAGC
(
2
)
3.8
0.0038
P10.5 crx+ retina
TGCAGCCAAA
(
2
)
1.9
0.0019
Adult retinal
AGAAAAGTAT
(
2
)
1.9
0.0019
Adult retinal
CAGGAGAAGC
(
2
)
1.9
0.0019
Adult retinal
TTTAAGAATG
(
2
)
1.9
0.0019
ONL
TTTAAGAATG
(
2
)
1.9
0.0019
