Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246200
1500026D16Rik
RIKEN cDNA 1500026D16 gene
19
19 A
68209
Human Homolog
AYP1[AYP1 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 7 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AGAATGACAG
(
2
)
8.2
0.0082
Cb medulloblastoma
AGAATGACAG
(
2
)
4.6
0.0046
Cb medulloblastoma
GCTAGCACCC
(
2
)
4.6
0.0046
P8 GC+1d culture
AGAATGACAG
(
2
)
5.7
0.0057
P8 GC+1d culture
GCTAGCACCC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AGAATGACAG
(
2
)
19.9
0.0199
P8 GC+SHH+1d culture
GCACCCCAGT (
4
)
2.3
0.0023
3T3 fibroblasts
AGAATGACAG
(
2
)
3.5
0.0035
P1 cortex
GCTAGCACCC
(
2
)
4.5
0.0045
Hypothalamus
AGAATGACAG
(
2
)
5.4
0.0054
Hypothalamus
GCACCCCAGT (
4
)
1.8
0.0018
E12.5 retina
AGAATGACAG
(
2
)
16.9
0.0169
E12.5 retina
ATCTGGTTCT
(
3
)
1.9
0.0019
E14.5 retina
AGAATGACAG
(
2
)
23.7
0.0237
E14.5 retina
ATCTGGTTCT
(
3
)
1.8
0.0018
E16.5 retina
AGAATGACAG
(
2
)
29
0.029
E18.5 retina
AGAATGACAG
(
2
)
21.8
0.0218
P0.5 retina
AGAATGACAG
(
2
)
7.9
0.0079
P2.5 retina
AGAATGACAG
(
2
)
14.1
0.0141
P2.5 retina
GCTAGCACCC
(
2
)
1.8
0.0018
P4.5 retina
AGAATGACAG
(
2
)
15.9
0.0159
P6.5 retina
AGAATGACAG
(
2
)
13.3
0.0133
P6.5 retina
GCTAGCACCC
(
2
)
1.7
0.0017
P10.5 crx- retina
AGAATGACAG
(
2
)
13
0.013
P10.5 crx- retina
ATCTGGTTCT
(
3
)
1.9
0.0019
P10.5 crx+ retina
AGAATGACAG
(
2
)
3.8
0.0038
P10.5 crx+ retina
GCTAGCACCC
(
2
)
1.9
0.0019
Adult retinal
AGAATGACAG
(
2
)
1.9
0.0019
ONL
AGAATGACAG
(
2
)
1.9
0.0019
ONL
ATCTGGTTCT
(
3
)
1.9
0.0019
