| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATAAAGCAA (2) ACAAAGTGTC GAAATAAAGA (2)
| 11.4 | 0.0114 |
| Cb medulloblastoma | AATAAAGCAA (2) ACAAAGTGTC CAGGTAAAAC GAAATAAAGA (2)
| 25.4 | 0.0254 |
| P8 GC+1d culture | AATAAAGCAA (2) ACAAAGTGTC CTTTCTGCTC (4) GAAATAAAGA (2)
| 11.4 | 0.0114 |
| P8 GC+SHH+1d culture | AATAAAGCAA (2) ACAAAGTGTC CTTTCTGCTC (4) GAAATAAAGA (2)
| 10.6 | 0.0106 |
| 3T3 fibroblasts | CAGGTAAAAC
| 3.5 | 0.0035 |
| E15 cortex | CTTTCTGCTC (4)
| 4.9 | 0.0049 |
| P1 cortex | ACAAAGTGTC CTTTCTGCTC (4)
| 13.6 | 0.0136 |
| Hypothalamus | ACAAAGTGTC CTTTCTGCTC (4) GAAATAAAGA (2)
| 19.9 | 0.0199 |
| E12.5 retina | ACAAAGTGTC GAAATAAAGA (2)
| 16.9 | 0.0169 |
| E14.5 retina | AATAAAGCAA (2) ACAAAGTGTC CAGGTAAAAC GAAATAAAGA (2)
| 12.6 | 0.0126 |
| E16.5 retina | CAGGTAAAAC CTTTCTGCTC (4) GAAATAAAGA (2)
| 9 | 0.009 |
| E18.5 retina | AATAAAGCAA (2) ACAAAGTGTC CAGGTAAAAC CTTTCTGCTC (4) GAAATAAAGA (2) GTATATTTCT
| 16.2 | 0.0162 |
| P0.5 retina | ACAAAGTGTC CAGGTAAAAC GAAATAAAGA (2)
| 15.8 | 0.0158 |
| P2.5 retina | AATAAAGCAA (2) ACAAAGTGTC CAGGTAAAAC CTTTCTGCTC (4) GAAATAAAGA (2) GTATATTTCT
| 14.2 | 0.0142 |
| P4.5 retina | CAGGTAAAAC CTTTCTGCTC (4) GAAATAAAGA (2)
| 11.9 | 0.0119 |
| P6.5 retina | ACAAAGTGTC CTTTCTGCTC (4) GAAATAAAGA (2)
| 16.7 | 0.0167 |
| P10.5 crx- retina | CTTTCTGCTC (4) GAAATAAAGA (2)
| 5.6 | 0.0056 |
| P10.5 crx+ retina | ACAAAGTGTC GAAATAAAGA (2)
| 11.5 | 0.0115 |
| Adult retinal | ACAAAGTGTC GAAATAAAGA (2) GTATATTTCT
| 13.1 | 0.0131 |
| ONL | CAGGTAAAAC GAAATAAAGA (2) GTATATTTCT
| 11.4 | 0.0114 |