Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246377	Tubb2	tubulin, beta 2	13	13 16.0 cM	22151
Gene Ontology	GTP binding | microtubule | microtubule-based process | structural constituent of cytoskeleton
Human Homolog	TUBB[tubulin, beta polypeptide]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 155 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AACACCTTCA (2) AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) CAAACACCGT (3) CCCTCACCCA (2) GACGAGATGG GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 62.1 0.0621 Cb medulloblastoma AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) GACGAGATGG TGTATAAAAA (3) TGTATAAAAT 64.7 0.0647 P8 GC+1d culture AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) CAAACACCGT (3) CCCTCACCCA (2) CTGGAGGACA (3) CTTTTTTATT TAACTTGGAT TGTATAAAAA (3) TGTATAAAAT 158.5 0.1585 P8 GC+SHH+1d culture AATGACCTGG AGTGGAGGGA (2) CAAACACCGT (3) CCCTCACCCA (2) GAGTCTGTGC GCAGTGAACT TGTATAAAAA (3) TGTATAAAAT 132.4 0.1324 3T3 fibroblasts AATGACCTGG AGTGGAGGGA (2) CAAACACCGT (3) GTCATAGCTG (2) GTGGCCATTT 52.5 0.0525 E15 cortex AATGACCTGG CCCTCACCCA (2) GACGAGATGG GTCATAGCTG (2) TGTATAAAAA (3) 98.9 0.0989 P1 cortex AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) CCCTCACCCA (2) CCTTTGCTTC CTTTTTTATT TGTATAAAAA (3) TGTATAAAAT 277 0.277 Hypothalamus AATGACCTGG AGTGGAGGGA (2) CCCTCACCCA (2) CCTTTGCTTC CTGGAGGACA (3) GAGTCTGTGC GCAGTGAACT GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 114 0.114 E12.5 retina AACACCTTCA (2) AATGACCTGG AGTGGAGGGA (2) TGTATAAAAA (3) 46.9 0.0469 E14.5 retina AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) AGTGGAGTGA (2) CCCTCACCCA (2) CTGGAGGACA (3) GACGAGATGG TGTATAAAAA (3) TGTATAAAAT TTGCTCTCCG 79.9 0.0799 E16.5 retina AACACCTTCA (2) AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) GACGAGATGG TAACTTGGAT TGTATAAAAA (3) TGTATAAAAT TTGCTCTCCG 114 0.114 E18.5 retina AATGACCTGG AGTGGAGGGA (2) CCCTCACCCA (2) CTGGAGGACA (3) GACGAGATGG TAACTTGGAT TGTATAAAAA (3) TGTATAAAAT 141.8 0.1418 P0.5 retina AAGGAGGTGG (2) AATGACCTGG AGTGGAGGGA (2) CCCTCACCCA (2) GTCATAGCTG (2) GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 98.2 0.0982 P2.5 retina AATGACCTGG CTGGAGGACA (3) CTTTTTTATT GAGTCTGTGC GTCATAGCTG (2) TGTATAAAAA (3) TGTATAAAAT 61.6 0.0616 P4.5 retina AATGACCTGG AGTGGAGTGA (2) GAGTCTGTGC GTCATAGCTG (2) TAACTTGGAT TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 99.1 0.0991 P6.5 retina AATGACCTGG AGTGGAGGGA (2) GACGAGATGG GAGTCTGTGC GTCATAGCTG (2) TGTATAAAAA (3) TGTATAAAAT TGTTTAAAAA (2) 105 0.105 P10.5 crx- retina AATGACCTGG AGTGGAGGGA (2) AGTGGAGTGA (2) CAAACACCGT (3) CTGGAGGACA (3) GAGTCTGTGC GTCTTTCTAT TGTATAAAAA (3) TGTATAAAAT 68.8 0.0688 P10.5 crx+ retina AACACCTTCA (2) AATGACCTGG AGTGGAGGGA (2) CTTTTTTATT GAGTCTGTGC TGTATAAAAA (3) TGTATAAAAT 78.6 0.0786 Adult retinal AACACCTTCA (2) AGTGGAGGGA (2) CAAACACCGT (3) GAGTCTGTGC GTCATAGCTG (2) GTGGCCATTT TGTATAAAAA (3) 50.2 0.0502 ONL AAGGAGGTGG (2) AGTGGAGGGA (2) GCAGTGAACT GTCATAGCTG (2) TGTATAAAAA (3) 40.1 0.0401