Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246385
Samd11
sterile alpha motif domain containing 11
4
231004
Human Homolog
SAMD11[sterile alpha motif domain containing 11]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 49 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GCCTCTCCTC
(
3
)
6.5
0.0065
P8 Cb GC
GTGGAAGCTG (
11
)
1.6
0.0016
Cb medulloblastoma
GCCTCTCCTC
(
3
)
4.6
0.0046
P8 GC+1d culture
GCCTCTCCTC
(
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCCTCTCCTC
(
3
)
5.9
0.0059
P8 GC+SHH+1d culture
AGCTGGGCAG (
3
)
1.2
0.0012
3T3 fibroblasts
AGCTGGGCAG (
3
)
3.5
0.0035
3T3 fibroblasts
TGGCAGATAG (
7
)
3.5
0.0035
E15 cortex
AGCTGGGCAG (
3
)
9.9
0.0099
E15 cortex
GCCTCTCCTC
(
3
)
9.9
0.0099
Hypothalamus
GCCTCTCCTC
(
3
)
3.6
0.0036
Hypothalamus
GAGCCGCCCT
(
2
)
1.8
0.0018
Hypothalamus
TGGCAGATAG (
7
)
1.8
0.0018
E12.5 retina
GAGCCGCCCT
(
2
)
1.9
0.0019
E12.5 retina
GCCTCTCCTC
(
3
)
1.9
0.0019
E12.5 retina
GTGGAAGCTG (
11
)
1.9
0.0019
E14.5 retina
GCCTCTCCTC
(
3
)
14.6
0.0146
E14.5 retina
GAGCCGCCCT
(
2
)
5.5
0.0055
E16.5 retina
GCCTCTCCTC
(
3
)
7.2
0.0072
E16.5 retina
GAGCCGCCCT
(
2
)
3.6
0.0036
E16.5 retina
GTGGAAGCTG (
11
)
3.6
0.0036
E18.5 retina
GCCTCTCCTC
(
3
)
12.7
0.0127
E18.5 retina
GAGCCGCCCT
(
2
)
1.8
0.0018
P0.5 retina
GAGCCGCCCT
(
2
)
9.8
0.0098
P0.5 retina
GCCTCTCCTC
(
3
)
7.9
0.0079
P0.5 retina
AATGGGGGGG (
2
)
2
0.002
P2.5 retina
GAGCCGCCCT
(
2
)
22.9
0.0229
P2.5 retina
GCCTCTCCTC
(
3
)
10.6
0.0106
P2.5 retina
GTGGAAGCTG (
11
)
1.8
0.0018
P4.5 retina
GAGCCGCCCT
(
2
)
57.5
0.0575
P4.5 retina
GCCTCTCCTC
(
3
)
4
0.004
P6.5 retina
GAGCCGCCCT
(
2
)
71.7
0.0717
P6.5 retina
GCCTCTCCTC
(
3
)
10
0.01
P6.5 retina
GCCAGCTTCC (
4
)
1.7
0.0017
P6.5 retina
GTGGAAGCTG (
11
)
1.7
0.0017
P10.5 crx- retina
GAGCCGCCCT
(
2
)
44.6
0.0446
P10.5 crx- retina
GCCTCTCCTC
(
3
)
16.7
0.0167
P10.5 crx- retina
GCCAGCTTCC (
4
)
1.9
0.0019
P10.5 crx- retina
GTGGAAGCTG (
11
)
1.9
0.0019
P10.5 crx- retina
TGGCAGATAG (
7
)
1.9
0.0019
P10.5 crx+ retina
GAGCCGCCCT
(
2
)
65.4
0.0654
P10.5 crx+ retina
GCCTCTCCTC
(
3
)
13.5
0.0135
Adult retinal
GAGCCGCCCT
(
2
)
55.5
0.0555
Adult retinal
GCCTCTCCTC
(
3
)
9.3
0.0093
Adult retinal
AATGGGGGGG (
2
)
1.9
0.0019
Adult retinal
GCCAGCTTCC (
4
)
1.9
0.0019
ONL
GAGCCGCCCT
(
2
)
11.5
0.0115
ONL
GCCTCTCCTC
(
3
)
3.8
0.0038
ONL
AATGGGGGGG (
2
)
1.9
0.0019
