Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24641
2810405J04Rik
RIKEN cDNA 2810405J04 gene
17
72722
Human Homolog
DKFZP564F0522[DKFZP564F0522 protein]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 83 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
TAAACACTGT
(
4
)
4.9
0.0049
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
TAAACACTGT
(
4
)
9.2
0.0092
Cb medulloblastoma
TGGGAGAGCC (
3
)
6.9
0.0069
Cb medulloblastoma
GAGACTGACA
(
3
)
2.3
0.0023
Cb medulloblastoma
GAGGCGACAA (
3
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TGGGAGAGCC (
3
)
12.6
0.0126
P8 GC+1d culture
GAGGCGACAA (
3
)
3.4
0.0034
P8 GC+1d culture
GAAACTGAAA (
6
)
1.1
0.0011
P8 GC+1d culture
TAAACACTGT
(
4
)
1.1
0.0011
P8 GC+1d culture
TGGGAAAGCC
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TGGGAGAGCC (
3
)
8.2
0.0082
P8 GC+SHH+1d culture
TAAACACTGT
(
4
)
3.5
0.0035
P8 GC+SHH+1d culture
GAGGCGACAA (
3
)
2.3
0.0023
P8 GC+SHH+1d culture
GCAGCTGTGA
(
3
)
1.2
0.0012
P8 GC+SHH+1d culture
TGGGAAAGCC
(
2
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
GAGACTGACA
(
3
)
3.5
0.0035
3T3 fibroblasts
GAGGCGACAA (
3
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
TGGGAGAGCC (
3
)
14.8
0.0148
E15 cortex
GCAGCTGTGA
(
3
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
TAAACACTGT
(
4
)
4.5
0.0045
P1 cortex
TGGGAGAGCC (
3
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
GAGGCGACAA (
3
)
3.6
0.0036
Hypothalamus
TAAACACTGT
(
4
)
3.6
0.0036
Hypothalamus
TGGGAGAGCC (
3
)
3.6
0.0036
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TAAACACTGT
(
4
)
13.1
0.0131
E12.5 retina
TGGGAGAGCC (
3
)
3.8
0.0038
E12.5 retina
GAAACTGAAA (
6
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TATGTTTTTC (
5
)
14.6
0.0146
E14.5 retina
TAAACACTGT
(
4
)
7.3
0.0073
E14.5 retina
TGGGAGAGCC (
3
)
3.6
0.0036
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
TAAACACTGT
(
4
)
5.4
0.0054
E16.5 retina
GAAACTGAAA (
6
)
1.8
0.0018
E16.5 retina
TGGGAGAGCC (
3
)
1.8
0.0018
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TGGGAGAGCC (
3
)
3.6
0.0036
E18.5 retina
GAGACTGACA
(
3
)
1.8
0.0018
E18.5 retina
TAAACACTGT
(
4
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
TAAACACTGT
(
4
)
3.9
0.0039
P0.5 retina
TGGGAGAGCC (
3
)
3.9
0.0039
P0.5 retina
GAAACTGAAA (
6
)
2
0.002
P0.5 retina
GAGGCGACAA (
3
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
TAAACACTGT
(
4
)
5.3
0.0053
P2.5 retina
TGGGAGAGCC (
3
)
5.3
0.0053
P2.5 retina
GAGGCGACAA (
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
TGGGAGAGCC (
3
)
11.9
0.0119
P4.5 retina
TAAACACTGT
(
4
)
4
0.004
P4.5 retina
GCAGCTGTGA
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TGGGAGAGCC (
3
)
10
0.01
P6.5 retina
GAGGCGACAA (
3
)
1.7
0.0017
P6.5 retina
TAAACACTGT
(
4
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TGGGAGAGCC (
3
)
5.6
0.0056
P10.5 crx- retina
GAGGCGACAA (
3
)
3.7
0.0037
P10.5 crx- retina
TAAACACTGT
(
4
)
3.7
0.0037
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TGGGAGAGCC (
3
)
7.7
0.0077
P10.5 crx+ retina
TAAACACTGT
(
4
)
3.8
0.0038
P10.5 crx+ retina
GAAACTGAAA (
6
)
1.9
0.0019
P10.5 crx+ retina
GAGGCGACAA (
3
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
TGGGAGAGCC (
3
)
9.3
0.0093
Adult retinal
GAGGCGACAA (
3
)
5.6
0.0056
Adult retinal
GCAGCTGTGA
(
3
)
1.9
0.0019
Adult retinal
TAAACACTGT
(
4
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
TATGTTTTTC (
5
)
5.7
0.0057
ONL
TAAACACTGT
(
4
)
3.8
0.0038
ONL
TGGGAAAGCC
(
2
)
1.9
0.0019
