Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246493	Thrap4	thyroid hormone receptor associated protein 4	11	11 D (11 56.5 cM)	23989
Gene Ontology	mediator complex | receptor activity | transcription from Pol II promoter
Human Homolog	THRAP4[thyroid hormone receptor associated protein 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AATGGGGAGT 1.6 0.0016 Cb medulloblastoma AATGGGGAGT TGTTGTGTTC 9.2 0.0092 P8 GC+1d culture AATGGGGAGT GCCAGGGAGA TGTTGTGTTC 13.7 0.0137 P8 GC+SHH+1d culture AATGGGGAGT GCCAGGGAGA TGTTGTGTTC TTGTGTGACC 14.1 0.0141 3T3 fibroblasts AATGGGGAGT GCCAGGGAGA 10.5 0.0105 E15 cortex AATGGGGAGT GCCAGGGAGA 14.8 0.0148 P1 cortex GCCAGGGAGA 4.5 0.0045 Hypothalamus AATGGGGAGT GAGAGAAGAT TGTTGTGTTC 7.2 0.0072 E12.5 retina AATGGGGAGT GCCAGGGAGA 5.7 0.0057 E14.5 retina AATGGGGAGT GCCAGGGAGA 7.3 0.0073 E16.5 retina AATGGGGAGT TGTTGTGTTC 9 0.009 E18.5 retina AATGGGGAGT 5.5 0.0055 P0.5 retina AATGGGGAGT GCCAGGGAGA TGTTGTGTTC 19.6 0.0196 P2.5 retina AATGGGGAGT TGTTGTGTTC 10.6 0.0106 P4.5 retina AATGGGGAGT GAGAGAAGAT TGTTGTGTTC 23.8 0.0238 P6.5 retina AATGGGGAGT GAGAGAAGAT GCCAGGGAGA TGTTGTGTTC 28.3 0.0283 P10.5 crx- retina AATGGGGAGT GCCAGGGAGA TGTTGTGTTC 5.7 0.0057 P10.5 crx+ retina AATGGGGAGT TGTTGTGTTC 5.7 0.0057 Adult retinal AATGGGGAGT TGTTGTGTTC 5.6 0.0056 ONL AATGGGGAGT TTGTGTGACC 5.7 0.0057