Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.24661	Hkr3	GLI-Kruppel family member HKR3	4		100090
Gene Ontology	nucleus | protein binding | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	HKR3[GLI-Kruppel family member HKR3]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTCCGAATT (2) CAGAAGAAAG GGACAGCACA TGACTTAGCA (3) 29.3 0.0293 Cb medulloblastoma CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 20.8 0.0208 P8 GC+1d culture CAGAAGAAAG GGACAGCACA GTGCACGTCT (2) 54.8 0.0548 P8 GC+SHH+1d culture CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 57.4 0.0574 3T3 fibroblasts GGACAGCACA GTGCACGTCT (2) 7 0.007 E15 cortex GGACAGCACA GTGCACGTCT (2) TGACTTAGCA (3) 19.7 0.0197 P1 cortex GTGCACGTCT (2) 13.6 0.0136 Hypothalamus CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 5.4 0.0054 E12.5 retina CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 50.7 0.0507 E14.5 retina CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 40.1 0.0401 E16.5 retina CAGAAGAAAG GGACAGCACA GTGCACGTCT (2) TGACTTAGCA (3) 30.7 0.0307 E18.5 retina CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 31 0.031 P0.5 retina CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 41.3 0.0413 P2.5 retina CAGAAGAAAG TGACTTAGCA (3) 42.3 0.0423 P4.5 retina ATTCCGAATT (2) CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 37.7 0.0377 P6.5 retina ATTCCGAATT (2) CAGAAGAAAG TGACTTAGCA (3) 30 0.03 P10.5 crx- retina CAGAAGAAAG GTGCACGTCT (2) 7.5 0.0075 P10.5 crx+ retina CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 13.4 0.0134 Adult retinal GTGCACGTCT (2) 1.9 0.0019 ONL ATTCCGAATT (2) CAGAAGAAAG GTGCACGTCT (2) TGACTTAGCA (3) 11.4 0.0114