Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.246713
D130008D20Rik
RIKEN cDNA D130008D20 gene
4
320093
Mm.246713
2810013E07Rik
RIKEN cDNA 2810013E07 gene
4
72656
Human Homolog
FLJ20530[hypothetical protein FLJ20530]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 60 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGTGTGAGGT (
6
)
13.1
0.0131
P8 Cb GC
GCTGTTTTGT
(
6
)
4.9
0.0049
P8 Cb GC
AATCAGGATG (
5
)
1.6
0.0016
P8 Cb GC
ACGCTATGGA
(
4
)
1.6
0.0016
P8 Cb GC
CCTGTGATCT (
8
)
1.6
0.0016
P8 GC+1d culture
TGTGTGAGGT (
6
)
35.4
0.0354
P8 GC+1d culture
GCTGTTTTGT
(
6
)
5.7
0.0057
P8 GC+1d culture
ACGCTATGGA
(
4
)
3.4
0.0034
P8 GC+SHH+1d culture
TGTGTGAGGT (
6
)
31.6
0.0316
P8 GC+SHH+1d culture
GCTGTTTTGT
(
6
)
4.7
0.0047
P8 GC+SHH+1d culture
ACGCTATGGA
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AACCTTGTCT
(
4
)
1.2
0.0012
3T3 fibroblasts
GCTGTTTTGT
(
6
)
17.5
0.0175
E15 cortex
TGTGTGAGGT (
6
)
29.7
0.0297
E15 cortex
GCTGTTTTGT
(
6
)
9.9
0.0099
P1 cortex
TGTGTGAGGT (
6
)
13.6
0.0136
P1 cortex
GCTGTTTTGT
(
6
)
4.5
0.0045
Hypothalamus
GCTGTTTTGT
(
6
)
1.8
0.0018
Hypothalamus
TGTGTGAGGT (
6
)
1.8
0.0018
E12.5 retina
AACCTTGTCT
(
4
)
7.5
0.0075
E12.5 retina
GCTGTTTTGT
(
6
)
7.5
0.0075
E12.5 retina
ACGCTATGGA
(
4
)
5.6
0.0056
E12.5 retina
TGTGTGAGGT (
6
)
3.8
0.0038
E14.5 retina
GCTGTTTTGT
(
6
)
3.6
0.0036
E14.5 retina
AACCTTGTCT
(
4
)
1.8
0.0018
E14.5 retina
ACGCTATGGA
(
4
)
1.8
0.0018
E14.5 retina
TGTGTGAGGT (
6
)
1.8
0.0018
E16.5 retina
GCTGTTTTGT
(
6
)
12.7
0.0127
E16.5 retina
TGTGTGAGGT (
6
)
10.9
0.0109
E16.5 retina
AACCTTGTCT
(
4
)
3.6
0.0036
E16.5 retina
CCTGTGATCT (
8
)
1.8
0.0018
E18.5 retina
TGTGTGAGGT (
6
)
5.5
0.0055
E18.5 retina
GCTGTTTTGT
(
6
)
3.6
0.0036
E18.5 retina
AACCTTGTCT
(
4
)
1.8
0.0018
P0.5 retina
TGTGTGAGGT (
6
)
9.8
0.0098
P0.5 retina
AACCTTGTCT
(
4
)
3.9
0.0039
P0.5 retina
ACGCTATGGA
(
4
)
3.9
0.0039
P0.5 retina
GCTGTTTTGT
(
6
)
3.9
0.0039
P2.5 retina
AACCTTGTCT
(
4
)
5.3
0.0053
P2.5 retina
GCTGTTTTGT
(
6
)
5.3
0.0053
P2.5 retina
ACGCTATGGA
(
4
)
1.8
0.0018
P2.5 retina
TGTGTGAGGT (
6
)
1.8
0.0018
P4.5 retina
GCTGTTTTGT
(
6
)
11.9
0.0119
P4.5 retina
TGTGTGAGGT (
6
)
5.9
0.0059
P6.5 retina
TGTGTGAGGT (
6
)
5
0.005
P6.5 retina
ACGCTATGGA
(
4
)
3.3
0.0033
P6.5 retina
GCTGTTTTGT
(
6
)
1.7
0.0017
P10.5 crx- retina
ACGCTATGGA
(
4
)
5.6
0.0056
P10.5 crx- retina
CCTGTGATCT (
8
)
3.7
0.0037
P10.5 crx- retina
AATCAGGATG (
5
)
1.9
0.0019
P10.5 crx- retina
GCTGTTTTGT
(
6
)
1.9
0.0019
P10.5 crx- retina
GTTGTTTGGA (
3
)
1.9
0.0019
P10.5 crx- retina
TGTGTGAGGT (
6
)
1.9
0.0019
P10.5 crx+ retina
GTTGTTTGGA (
3
)
5.8
0.0058
P10.5 crx+ retina
AACCTTGTCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
ACGCTATGGA
(
4
)
1.9
0.0019
Adult retinal
TGTGTGAGGT (
6
)
1.9
0.0019
ONL
GCTGTTTTGT
(
6
)
5.7
0.0057
ONL
AATCAGGATG (
5
)
1.9
0.0019
ONL
CCTGTGATCT (
8
)
1.9
0.0019
