Mouse Retina SAGE Library    [Home]    [Libraries]    [Images]

Gene:              Accession:    
e.g., Rho or Rhodopsin e.g., BG297543 batch search
Tag:        Cytoband (Mm):    
e.g., CCCAGTTCAC e.g., 6 E3
Unigene:        Cytoband (Hs):    
e.g., Mm.2965 batch search e.g., 3q21-q24


 UniGene  Symbol  Name  Chr  Cytoband  LocusLink 
 Mm.246869 8430423A01RikRIKEN cDNA 8430423A01 gene 1  1 E4  98415 
 Mm.246869 2700010L10RikRIKEN cDNA 2700010L10 gene 1    108914 
 Clusters 
   Neighbors    

Total 3 In Situ Hybridization Images

Images -- Click to Enlarge



SAGE Tags

Total 143 tags found with positive counts.

  all tags    reliable tags    sum by library with all tags    sum by library with reliable tags  
 Library  Tag (Other Genes)  Normalized Count  % in library 
P8 Cb GCGAAGGTTTGC (2)3.30.0033
P8 Cb GCGGCTGGAAAG (5)3.30.0033
P8 Cb GCGTGTCTCAAA (2)3.30.0033
P8 Cb GCTTTGTCTCAG (3)3.30.0033
P8 Cb GCATAATGACAT (6)1.60.0016
P8 Cb GCGCTGCAAAGC (2)1.60.0016
P8 Cb GCGGGGGGAGGG (17)1.60.0016
P8 Cb GCGTACTAAGGA (3)1.60.0016
P8 Cb GCTTAACTTCAA (8)1.60.0016
P8 Cb GCTTGGTATTGT (3)1.60.0016
Cb medulloblastomaATAATGACAT (6)6.90.0069
Cb medulloblastomaATAGTGACAT (3)4.60.0046
Cb medulloblastomaGTGTCTCAAA (2)4.60.0046
Cb medulloblastomaTTTGTCTCAG (3)4.60.0046
Cb medulloblastomaATTTCTGAAT (4)2.30.0023
Cb medulloblastomaGTGTGCGGAC (2)2.30.0023
Cb medulloblastomaTTATTTTTAG (6)2.30.0023
Cb medulloblastomaTTCGCTGTCG (2)2.30.0023
Cb medulloblastomaTTGGTATTGT (3)2.30.0023
P8 GC+1d cultureTTCTCTTCTC (4)80.008
P8 GC+1d cultureTTAACTTCAA (8)3.40.0034
P8 GC+1d cultureTTTGTCTCAG (3)3.40.0034
P8 GC+1d cultureCTCTGGGGGC (4)2.30.0023
P8 GC+1d cultureTTGGTATTGT (3)2.30.0023
P8 GC+1d cultureATAATGACAT (6)1.10.0011
P8 GC+1d cultureATAGTGACAT (3)1.10.0011
P8 GC+1d cultureATTTCTGAAT (4)1.10.0011
P8 GC+1d cultureTTATTTTTAG (6)1.10.0011
P8 GC+SHH+1d cultureGGGGAGGGTA (4)3.50.0035
P8 GC+SHH+1d cultureTTATTTTTAG (6)3.50.0035
P8 GC+SHH+1d cultureTTCTCTTCTC (4)3.50.0035
P8 GC+SHH+1d cultureAATTCTGGAT (6)2.30.0023
P8 GC+SHH+1d cultureGTGTCTCAAA (2)2.30.0023
P8 GC+SHH+1d cultureTTAACTTCAA (8)2.30.0023
P8 GC+SHH+1d cultureTTGGTATTGT (3)2.30.0023
P8 GC+SHH+1d cultureTTTGTCTCAG (3)2.30.0023
P8 GC+SHH+1d cultureATAATGACAT (6)1.20.0012
P8 GC+SHH+1d cultureGTACTAAGGA (3)1.20.0012
3T3 fibroblastsTCTCGGCCTG (3)210.021
3T3 fibroblastsTTCGCTGTCG (2)10.50.0105
3T3 fibroblastsCTCTGGGGGC (4)3.50.0035
3T3 fibroblastsGGCTTTCAGT (4)3.50.0035
3T3 fibroblastsTTGGTATTGT (3)3.50.0035
E15 cortexTTTGTCTCAG (3)4.90.0049
P1 cortexTTATTTTTAG (6)9.10.0091
P1 cortexTTCTCTTCTC (4)9.10.0091
P1 cortexGTGTCTCAAA (2)4.50.0045
P1 cortexTCTCGGCCTG (3)4.50.0045
P1 cortexTTGGTATTGT (3)4.50.0045
P1 cortexTTTGTCTCAG (3)4.50.0045
HypothalamusGGGGGGGGGA (14)3.60.0036
HypothalamusATAGTGACAT (3)1.80.0018
HypothalamusGAAGGTTTGC (2)1.80.0018
HypothalamusGGGGAGGGTA (4)1.80.0018
E12.5 retinaGGCTTTCAGT (4)5.60.0056
E12.5 retinaGGGGGGGGGA (14)3.80.0038
E12.5 retinaTTTGTCTCAG (3)3.80.0038
E12.5 retinaAATTCTGGAT (6)1.90.0019
E12.5 retinaATTTCTGAAT (4)1.90.0019
E12.5 retinaGCTGCAAAGC (2)1.90.0019
E12.5 retinaGTACTAAGGA (3)1.90.0019
E12.5 retinaGTGTGCGGAC (2)1.90.0019
E12.5 retinaTTATTTTTAG (6)1.90.0019
E12.5 retinaTTCGCTGTCG (2)1.90.0019
E12.5 retinaTTCTCTTCTC (4)1.90.0019
E12.5 retinaTTGGTATTGT (3)1.90.0019
E14.5 retinaGTGTCTCAAA (2)1.80.0018
E16.5 retinaATTTCTGAAT (4)7.20.0072
E16.5 retinaAATAAAATAT (4)3.60.0036
E16.5 retinaTTGGTATTGT (3)1.80.0018
E18.5 retinaATTTCTGAAT (4)9.10.0091
E18.5 retinaTCACTTAAAA (3)3.60.0036
E18.5 retinaTTTGTCTCAG (3)3.60.0036
E18.5 retinaGGGGGGAGGG (17)1.80.0018
E18.5 retinaGGGGGGGGGA (14)1.80.0018
E18.5 retinaGTGTCTCAAA (2)1.80.0018
E18.5 retinaTTTTCAATGG (7)1.80.0018
P0.5 retinaATAGTGACAT (3)3.90.0039
P0.5 retinaTTTGTCTCAG (3)3.90.0039
P0.5 retinaGTGTCTCAAA (2)20.002
P0.5 retinaGTGTGCGGAC (2)20.002
P0.5 retinaTTATTTTTAG (6)20.002
P0.5 retinaTTCGCTGTCG (2)20.002
P0.5 retinaTTGGTATTGT (3)20.002
P0.5 retinaTTTTCAATGG (7)20.002
P2.5 retinaATTTCTGAAT (4)14.10.0141
P2.5 retinaGTGTCTCAAA (2)5.30.0053
P2.5 retinaGGGGAGGGTA (4)3.50.0035
P2.5 retinaTTCTCTTCTC (4)3.50.0035
P2.5 retinaTTTGTCTCAG (3)3.50.0035
P2.5 retinaGCTGCAAAGC (2)1.80.0018
P2.5 retinaGGCTTTCAGT (4)1.80.0018
P2.5 retinaGGGGGGAGGG (17)1.80.0018
P2.5 retinaGTACTAAGGA (3)1.80.0018
P2.5 retinaTTTTCAATGG (7)1.80.0018
P4.5 retinaATTTCTGAAT (4)40.004
P4.5 retinaGTACTAAGGA (3)40.004
P4.5 retinaTTCTCTTCTC (4)40.004
P4.5 retinaTTTTCAATGG (7)40.004
P4.5 retinaATAATGACAT (6)20.002
P4.5 retinaGGGGGGAGGG (17)20.002
P4.5 retinaGGGGGGGGGA (14)20.002
P4.5 retinaGTGTCTCAAA (2)20.002
P4.5 retinaGTGTGCGGAC (2)20.002
P4.5 retinaTTTGTCTCAG (3)20.002
P6.5 retinaATTTCTGAAT (4)6.70.0067
P6.5 retinaTTATTTTTAG (6)50.005
P6.5 retinaTTCTCTTCTC (4)50.005
P6.5 retinaGTACTAAGGA (3)1.70.0017
P6.5 retinaGTGTCTCAAA (2)1.70.0017
P10.5 crx- retinaATTTCTGAAT (4)7.40.0074
P10.5 crx- retinaTTCTCTTCTC (4)3.70.0037
P10.5 crx- retinaGCTGCAAAGC (2)1.90.0019
P10.5 crx- retinaGGCTTTCAGT (4)1.90.0019
P10.5 crx- retinaGGGGGGGGGA (14)1.90.0019
P10.5 crx- retinaTTCTGAGCAG (9)1.90.0019
P10.5 crx- retinaTTTGTCTCAG (3)1.90.0019
P10.5 crx- retinaTTTTCAATGG (7)1.90.0019
P10.5 crx+ retinaTTTGTCTCAG (3)7.70.0077
P10.5 crx+ retinaATTTCTGAAT (4)5.80.0058
P10.5 crx+ retinaTTGGTATTGT (3)5.80.0058
P10.5 crx+ retinaGTACTAAGGA (3)3.80.0038
P10.5 crx+ retinaTTAACTTCAA (8)3.80.0038
P10.5 crx+ retinaGGCTTTCAGT (4)1.90.0019
P10.5 crx+ retinaGGGGGGAGGG (17)1.90.0019
P10.5 crx+ retinaTTCTCTTCTC (4)1.90.0019
Adult retinalTTCTCTTCTC (4)130.013
Adult retinalATTTCTGAAT (4)5.60.0056
Adult retinalATAGTGACAT (3)3.70.0037
Adult retinalGTACTAAGGA (3)3.70.0037
Adult retinalATAATGACAT (6)1.90.0019
Adult retinalTCTCGGCCTG (3)1.90.0019
Adult retinalTTATTTTTAG (6)1.90.0019
Adult retinalTTGGTATTGT (3)1.90.0019
ONLATTTCTGAAT (4)7.70.0077
ONLGGCTGGAAAG (5)3.80.0038
ONLTCACTTAAAA (3)3.80.0038
ONLTTTGTCTCAG (3)3.80.0038
ONLAATAAAATAT (4)1.90.0019
ONLGGGGAGGGTA (4)1.90.0019
ONLGGGGGGAGGG (17)1.90.0019
ONLGTACTAAGGA (3)1.90.0019
ONLTTCTCTTCTC (4)1.90.0019