Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.246869	8430423A01Rik	RIKEN cDNA 8430423A01 gene	1	1 E4	98415
Mm.246869	2700010L10Rik	RIKEN cDNA 2700010L10 gene	1		108914
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 3 In Situ Hybridization Images

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SAGE Tags

Total 143 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGGTTTGC (2) 3.3 0.0033 P8 Cb GC GGCTGGAAAG (5) 3.3 0.0033 P8 Cb GC GTGTCTCAAA (2) 3.3 0.0033 P8 Cb GC TTTGTCTCAG (3) 3.3 0.0033 P8 Cb GC ATAATGACAT (6) 1.6 0.0016 P8 Cb GC GCTGCAAAGC (2) 1.6 0.0016 P8 Cb GC GGGGGGAGGG (17) 1.6 0.0016 P8 Cb GC GTACTAAGGA (3) 1.6 0.0016 P8 Cb GC TTAACTTCAA (8) 1.6 0.0016 P8 Cb GC TTGGTATTGT (3) 1.6 0.0016 Cb medulloblastoma ATAATGACAT (6) 6.9 0.0069 Cb medulloblastoma ATAGTGACAT (3) 4.6 0.0046 Cb medulloblastoma GTGTCTCAAA (2) 4.6 0.0046 Cb medulloblastoma TTTGTCTCAG (3) 4.6 0.0046 Cb medulloblastoma ATTTCTGAAT (4) 2.3 0.0023 Cb medulloblastoma GTGTGCGGAC (2) 2.3 0.0023 Cb medulloblastoma TTATTTTTAG (6) 2.3 0.0023 Cb medulloblastoma TTCGCTGTCG (2) 2.3 0.0023 Cb medulloblastoma TTGGTATTGT (3) 2.3 0.0023 P8 GC+1d culture TTCTCTTCTC (4) 8 0.008 P8 GC+1d culture TTAACTTCAA (8) 3.4 0.0034 P8 GC+1d culture TTTGTCTCAG (3) 3.4 0.0034 P8 GC+1d culture CTCTGGGGGC (4) 2.3 0.0023 P8 GC+1d culture TTGGTATTGT (3) 2.3 0.0023 P8 GC+1d culture ATAATGACAT (6) 1.1 0.0011 P8 GC+1d culture ATAGTGACAT (3) 1.1 0.0011 P8 GC+1d culture ATTTCTGAAT (4) 1.1 0.0011 P8 GC+1d culture TTATTTTTAG (6) 1.1 0.0011 P8 GC+SHH+1d culture GGGGAGGGTA (4) 3.5 0.0035 P8 GC+SHH+1d culture TTATTTTTAG (6) 3.5 0.0035 P8 GC+SHH+1d culture TTCTCTTCTC (4) 3.5 0.0035 P8 GC+SHH+1d culture AATTCTGGAT (6) 2.3 0.0023 P8 GC+SHH+1d culture GTGTCTCAAA (2) 2.3 0.0023 P8 GC+SHH+1d culture TTAACTTCAA (8) 2.3 0.0023 P8 GC+SHH+1d culture TTGGTATTGT (3) 2.3 0.0023 P8 GC+SHH+1d culture TTTGTCTCAG (3) 2.3 0.0023 P8 GC+SHH+1d culture ATAATGACAT (6) 1.2 0.0012 P8 GC+SHH+1d culture GTACTAAGGA (3) 1.2 0.0012 3T3 fibroblasts TCTCGGCCTG (3) 21 0.021 3T3 fibroblasts TTCGCTGTCG (2) 10.5 0.0105 3T3 fibroblasts CTCTGGGGGC (4) 3.5 0.0035 3T3 fibroblasts GGCTTTCAGT (4) 3.5 0.0035 3T3 fibroblasts TTGGTATTGT (3) 3.5 0.0035 E15 cortex TTTGTCTCAG (3) 4.9 0.0049 P1 cortex TTATTTTTAG (6) 9.1 0.0091 P1 cortex TTCTCTTCTC (4) 9.1 0.0091 P1 cortex GTGTCTCAAA (2) 4.5 0.0045 P1 cortex TCTCGGCCTG (3) 4.5 0.0045 P1 cortex TTGGTATTGT (3) 4.5 0.0045 P1 cortex TTTGTCTCAG (3) 4.5 0.0045 Hypothalamus GGGGGGGGGA (14) 3.6 0.0036 Hypothalamus ATAGTGACAT (3) 1.8 0.0018 Hypothalamus GAAGGTTTGC (2) 1.8 0.0018 Hypothalamus GGGGAGGGTA (4) 1.8 0.0018 E12.5 retina GGCTTTCAGT (4) 5.6 0.0056 E12.5 retina GGGGGGGGGA (14) 3.8 0.0038 E12.5 retina TTTGTCTCAG (3) 3.8 0.0038 E12.5 retina AATTCTGGAT (6) 1.9 0.0019 E12.5 retina ATTTCTGAAT (4) 1.9 0.0019 E12.5 retina GCTGCAAAGC (2) 1.9 0.0019 E12.5 retina GTACTAAGGA (3) 1.9 0.0019 E12.5 retina GTGTGCGGAC (2) 1.9 0.0019 E12.5 retina TTATTTTTAG (6) 1.9 0.0019 E12.5 retina TTCGCTGTCG (2) 1.9 0.0019 E12.5 retina TTCTCTTCTC (4) 1.9 0.0019 E12.5 retina TTGGTATTGT (3) 1.9 0.0019 E14.5 retina GTGTCTCAAA (2) 1.8 0.0018 E16.5 retina ATTTCTGAAT (4) 7.2 0.0072 E16.5 retina AATAAAATAT (4) 3.6 0.0036 E16.5 retina TTGGTATTGT (3) 1.8 0.0018 E18.5 retina ATTTCTGAAT (4) 9.1 0.0091 E18.5 retina TCACTTAAAA (3) 3.6 0.0036 E18.5 retina TTTGTCTCAG (3) 3.6 0.0036 E18.5 retina GGGGGGAGGG (17) 1.8 0.0018 E18.5 retina GGGGGGGGGA (14) 1.8 0.0018 E18.5 retina GTGTCTCAAA (2) 1.8 0.0018 E18.5 retina TTTTCAATGG (7) 1.8 0.0018 P0.5 retina ATAGTGACAT (3) 3.9 0.0039 P0.5 retina TTTGTCTCAG (3) 3.9 0.0039 P0.5 retina GTGTCTCAAA (2) 2 0.002 P0.5 retina GTGTGCGGAC (2) 2 0.002 P0.5 retina TTATTTTTAG (6) 2 0.002 P0.5 retina TTCGCTGTCG (2) 2 0.002 P0.5 retina TTGGTATTGT (3) 2 0.002 P0.5 retina TTTTCAATGG (7) 2 0.002 P2.5 retina ATTTCTGAAT (4) 14.1 0.0141 P2.5 retina GTGTCTCAAA (2) 5.3 0.0053 P2.5 retina GGGGAGGGTA (4) 3.5 0.0035 P2.5 retina TTCTCTTCTC (4) 3.5 0.0035 P2.5 retina TTTGTCTCAG (3) 3.5 0.0035 P2.5 retina GCTGCAAAGC (2) 1.8 0.0018 P2.5 retina GGCTTTCAGT (4) 1.8 0.0018 P2.5 retina GGGGGGAGGG (17) 1.8 0.0018 P2.5 retina GTACTAAGGA (3) 1.8 0.0018 P2.5 retina TTTTCAATGG (7) 1.8 0.0018 P4.5 retina ATTTCTGAAT (4) 4 0.004 P4.5 retina GTACTAAGGA (3) 4 0.004 P4.5 retina TTCTCTTCTC (4) 4 0.004 P4.5 retina TTTTCAATGG (7) 4 0.004 P4.5 retina ATAATGACAT (6) 2 0.002 P4.5 retina GGGGGGAGGG (17) 2 0.002 P4.5 retina GGGGGGGGGA (14) 2 0.002 P4.5 retina GTGTCTCAAA (2) 2 0.002 P4.5 retina GTGTGCGGAC (2) 2 0.002 P4.5 retina TTTGTCTCAG (3) 2 0.002 P6.5 retina ATTTCTGAAT (4) 6.7 0.0067 P6.5 retina TTATTTTTAG (6) 5 0.005 P6.5 retina TTCTCTTCTC (4) 5 0.005 P6.5 retina GTACTAAGGA (3) 1.7 0.0017 P6.5 retina GTGTCTCAAA (2) 1.7 0.0017 P10.5 crx- retina ATTTCTGAAT (4) 7.4 0.0074 P10.5 crx- retina TTCTCTTCTC (4) 3.7 0.0037 P10.5 crx- retina GCTGCAAAGC (2) 1.9 0.0019 P10.5 crx- retina GGCTTTCAGT (4) 1.9 0.0019 P10.5 crx- retina GGGGGGGGGA (14) 1.9 0.0019 P10.5 crx- retina TTCTGAGCAG (9) 1.9 0.0019 P10.5 crx- retina TTTGTCTCAG (3) 1.9 0.0019 P10.5 crx- retina TTTTCAATGG (7) 1.9 0.0019 P10.5 crx+ retina TTTGTCTCAG (3) 7.7 0.0077 P10.5 crx+ retina ATTTCTGAAT (4) 5.8 0.0058 P10.5 crx+ retina TTGGTATTGT (3) 5.8 0.0058 P10.5 crx+ retina GTACTAAGGA (3) 3.8 0.0038 P10.5 crx+ retina TTAACTTCAA (8) 3.8 0.0038 P10.5 crx+ retina GGCTTTCAGT (4) 1.9 0.0019 P10.5 crx+ retina GGGGGGAGGG (17) 1.9 0.0019 P10.5 crx+ retina TTCTCTTCTC (4) 1.9 0.0019 Adult retinal TTCTCTTCTC (4) 13 0.013 Adult retinal ATTTCTGAAT (4) 5.6 0.0056 Adult retinal ATAGTGACAT (3) 3.7 0.0037 Adult retinal GTACTAAGGA (3) 3.7 0.0037 Adult retinal ATAATGACAT (6) 1.9 0.0019 Adult retinal TCTCGGCCTG (3) 1.9 0.0019 Adult retinal TTATTTTTAG (6) 1.9 0.0019 Adult retinal TTGGTATTGT (3) 1.9 0.0019 ONL ATTTCTGAAT (4) 7.7 0.0077 ONL GGCTGGAAAG (5) 3.8 0.0038 ONL TCACTTAAAA (3) 3.8 0.0038 ONL TTTGTCTCAG (3) 3.8 0.0038 ONL AATAAAATAT (4) 1.9 0.0019 ONL GGGGAGGGTA (4) 1.9 0.0019 ONL GGGGGGAGGG (17) 1.9 0.0019 ONL GTACTAAGGA (3) 1.9 0.0019 ONL TTCTCTTCTC (4) 1.9 0.0019