Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247080	Lsm7	LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)	10		66094
Gene Ontology	cytoplasm | mRNA catabolism | protein heterodimerization activity
Human Homolog	LSM7[LSM7 homolog, U6 small nuclear RNA associated (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 37 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGAAAAAAAA (81) 27.7 0.0277 P8 Cb GC GTCCCATCCA (2) 1.6 0.0016 Cb medulloblastoma TGAAAAAAAA (81) 78.6 0.0786 Cb medulloblastoma TGGGCAAAAA (6) 2.3 0.0023 P8 GC+1d culture TGAAAAAAAA (81) 26.3 0.0263 P8 GC+SHH+1d culture TGAAAAAAAA (81) 57.4 0.0574 P8 GC+SHH+1d culture GTCCCATCCA (2) 1.2 0.0012 P8 GC+SHH+1d culture TGGGCAAAAA (6) 1.2 0.0012 3T3 fibroblasts TGAAAAAAAA (81) 7 0.007 E15 cortex TGAAAAAAAA (81) 29.7 0.0297 P1 cortex TGAAAAAAAA (81) 4.5 0.0045 Hypothalamus TGAAAAAAAA (81) 36.2 0.0362 Hypothalamus GAGGCCATCC (5) 7.2 0.0072 E12.5 retina TGAAAAAAAA (81) 31.9 0.0319 E12.5 retina GAGGCCATCC (5) 1.9 0.0019 E14.5 retina TGAAAAAAAA (81) 49.2 0.0492 E14.5 retina GAGGCCATCC (5) 1.8 0.0018 E14.5 retina GTCCCATCCA (2) 1.8 0.0018 E16.5 retina TGAAAAAAAA (81) 16.3 0.0163 E18.5 retina TGAAAAAAAA (81) 74.6 0.0746 P0.5 retina TGAAAAAAAA (81) 15.7 0.0157 P2.5 retina TGAAAAAAAA (81) 42.2 0.0422 P2.5 retina GAGGCCATCC (5) 1.8 0.0018 P2.5 retina GTCCCATCCA (2) 1.8 0.0018 P4.5 retina TGAAAAAAAA (81) 43.6 0.0436 P4.5 retina TGGGCAAAAA (6) 2 0.002 P6.5 retina TGAAAAAAAA (81) 33.3 0.0333 P6.5 retina GAGGCCATCC (5) 1.7 0.0017 P10.5 crx- retina TGAAAAAAAA (81) 9.3 0.0093 P10.5 crx- retina GTCCCATCCA (2) 1.9 0.0019 P10.5 crx+ retina TGAAAAAAAA (81) 19.2 0.0192 P10.5 crx+ retina GTCCCATCCA (2) 1.9 0.0019 P10.5 crx+ retina TGGGCAAAAA (6) 1.9 0.0019 Adult retinal TGAAAAAAAA (81) 13 0.013 Adult retinal TGGGCAAAAA (6) 1.9 0.0019 ONL TGAAAAAAAA (81) 19.2 0.0192 ONL GAGGCCATCC (5) 1.9 0.0019