Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2474	Nhlh1	nescient helix loop helix 1	1	1 H3 (1 93.4 cM)	18071
Gene Ontology	cell differentiation | DNA binding | regulation of transcription, DNA-dependent
Human Homolog	NHLH1[nescient helix loop helix 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 35 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGCTGGACGT (3) 17.9 0.0179 Cb medulloblastoma TGCTGGACGT (3) 16.2 0.0162 P8 GC+1d culture TGCTGGACGT (3) 51.4 0.0514 P8 GC+1d culture CTGCTGAGCC (2) 25.1 0.0251 P8 GC+1d culture GAATTTTGAA (8) 1.1 0.0011 P8 GC+SHH+1d culture TGCTGGACGT (3) 45.7 0.0457 P8 GC+SHH+1d culture CTGCTGAGCC (2) 10.5 0.0105 P8 GC+SHH+1d culture GAATTTTGAA (8) 3.5 0.0035 3T3 fibroblasts TGCTGGACGT (3) 3.5 0.0035 E15 cortex TGCTGGACGT (3) 9.9 0.0099 P1 cortex TGCTGGACGT (3) 9.1 0.0091 Hypothalamus GAATTTTGAA (8) 1.8 0.0018 Hypothalamus TGCTGGACGT (3) 1.8 0.0018 E12.5 retina TGCTGGACGT (3) 18.8 0.0188 E12.5 retina CTGCTGAGCC (2) 1.9 0.0019 E14.5 retina TGCTGGACGT (3) 12.8 0.0128 E16.5 retina TGCTGGACGT (3) 19.9 0.0199 E16.5 retina GAATTTTGAA (8) 5.4 0.0054 E16.5 retina CTGCTGAGCC (2) 1.8 0.0018 E18.5 retina TGCTGGACGT (3) 21.8 0.0218 E18.5 retina GAATTTTGAA (8) 1.8 0.0018 P0.5 retina TGCTGGACGT (3) 9.8 0.0098 P2.5 retina TGCTGGACGT (3) 22.9 0.0229 P4.5 retina TGCTGGACGT (3) 9.9 0.0099 P4.5 retina CTGCTGAGCC (2) 2 0.002 P6.5 retina TGCTGGACGT (3) 8.3 0.0083 P10.5 crx- retina TGCTGGACGT (3) 9.3 0.0093 P10.5 crx- retina CTGCTGAGCC (2) 1.9 0.0019 P10.5 crx- retina GAATTTTGAA (8) 1.9 0.0019 P10.5 crx+ retina GAATTTTGAA (8) 3.8 0.0038 P10.5 crx+ retina TGCTGGACGT (3) 3.8 0.0038 Adult retinal TGCTGGACGT (3) 3.7 0.0037 Adult retinal GAATTTTGAA (8) 1.9 0.0019 ONL CTGCTGAGCC (2) 1.9 0.0019 ONL TGCTGGACGT (3) 1.9 0.0019