Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.247537
9130416N05Rik
RIKEN cDNA 9130416N05 gene
1
109346
Gene Ontology
DNA binding
Human Homolog
MGC41816[hypothetical protein MGC41816]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 51 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAAAAAAAAA (
157
)
47.3
0.0473
P8 Cb GC
GAGCAGGGGA (
3
)
8.2
0.0082
Cb medulloblastoma
CAAAAAAAAA (
157
)
92.5
0.0925
Cb medulloblastoma
GAGCAGGGGA (
3
)
18.5
0.0185
P8 GC+1d culture
CAAAAAAAAA (
157
)
37.7
0.0377
P8 GC+1d culture
GAGCAGGGGA (
3
)
8
0.008
P8 GC+SHH+1d culture
CAAAAAAAAA (
157
)
58.5
0.0585
P8 GC+SHH+1d culture
GAGCAGGGGA (
3
)
9.4
0.0094
P8 GC+SHH+1d culture
CAGGTCTCTA
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
TGATAGCAGC (
3
)
1.2
0.0012
3T3 fibroblasts
GAGCAGGGGA (
3
)
3.5
0.0035
E15 cortex
CAAAAAAAAA (
157
)
34.6
0.0346
E15 cortex
GAGCAGGGGA (
3
)
9.9
0.0099
P1 cortex
CAAAAAAAAA (
157
)
22.7
0.0227
Hypothalamus
CAAAAAAAAA (
157
)
39.8
0.0398
Hypothalamus
GAGCAGGGGA (
3
)
5.4
0.0054
Hypothalamus
TGATAGCAGC (
3
)
1.8
0.0018
E12.5 retina
CAAAAAAAAA (
157
)
22.5
0.0225
E12.5 retina
GAGCAGGGGA (
3
)
1.9
0.0019
E14.5 retina
GAGCAGGGGA (
3
)
14.6
0.0146
E14.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E14.5 retina
TACAGACACA
1.8
0.0018
E16.5 retina
GAGCAGGGGA (
3
)
14.5
0.0145
E16.5 retina
CAAAAAAAAA (
157
)
9.1
0.0091
E16.5 retina
TACAGACACA
1.8
0.0018
E18.5 retina
CAAAAAAAAA (
157
)
41.8
0.0418
E18.5 retina
GAGCAGGGGA (
3
)
7.3
0.0073
P0.5 retina
CAAAAAAAAA (
157
)
137.4
0.1374
P0.5 retina
GAGCAGGGGA (
3
)
7.9
0.0079
P2.5 retina
CAAAAAAAAA (
157
)
52.8
0.0528
P2.5 retina
GAGCAGGGGA (
3
)
12.3
0.0123
P2.5 retina
CAGGTCTCTA
(
2
)
3.5
0.0035
P2.5 retina
GGCAAAGATA
1.8
0.0018
P2.5 retina
TACAGACACA
1.8
0.0018
P4.5 retina
CAAAAAAAAA (
157
)
41.6
0.0416
P4.5 retina
GAGCAGGGGA (
3
)
5.9
0.0059
P4.5 retina
TGATAGCAGC (
3
)
4
0.004
P6.5 retina
CAAAAAAAAA (
157
)
31.7
0.0317
P6.5 retina
GAGCAGGGGA (
3
)
11.7
0.0117
P6.5 retina
GGCAAAGATA
1.7
0.0017
P6.5 retina
TACAGACACA
1.7
0.0017
P10.5 crx- retina
CAAAAAAAAA (
157
)
13
0.013
P10.5 crx- retina
GAGCAGGGGA (
3
)
7.4
0.0074
P10.5 crx- retina
GGCAAAGATA
5.6
0.0056
P10.5 crx+ retina
CAAAAAAAAA (
157
)
32.7
0.0327
P10.5 crx+ retina
GAGCAGGGGA (
3
)
28.8
0.0288
Adult retinal
CAAAAAAAAA (
157
)
20.4
0.0204
Adult retinal
CAGGTCTCTA
(
2
)
1.9
0.0019
Adult retinal
GAGCAGGGGA (
3
)
1.9
0.0019
ONL
CAAAAAAAAA (
157
)
17.2
0.0172
ONL
TACAGACACA
1.9
0.0019
