Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.247676	Hmbs	hydroxymethylbilane synthase	9	9 26.0 cM	15288
Gene Ontology	heme biosynthesis | hydroxymethylbilane synthase activity | porphyrin biosynthesis | transferase activity
Human Homolog	HMBS[hydroxymethylbilane synthase]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 57 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGCTGCAGAA (2) 4.9 0.0049 P8 Cb GC CCAATCTTTG 1.6 0.0016 P8 Cb GC TATGCCTGTG (4) 1.6 0.0016 P8 Cb GC TTCTGGGCTC (5) 1.6 0.0016 Cb medulloblastoma TTCTGGGCTC (5) 4.6 0.0046 Cb medulloblastoma CCAATCTTTG 2.3 0.0023 P8 GC+1d culture GGCTGCAGAA (2) 4.6 0.0046 P8 GC+1d culture TTCTGGGCTC (5) 2.3 0.0023 P8 GC+SHH+1d culture GGCTGCAGAA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACCTGCTGGG (7) 1.2 0.0012 P8 GC+SHH+1d culture CCAATCTTTG 1.2 0.0012 P8 GC+SHH+1d culture CTAAACTGGT (3) 1.2 0.0012 P8 GC+SHH+1d culture TTCTGGGCTC (5) 1.2 0.0012 3T3 fibroblasts TTCTGGGCTC (5) 7 0.007 3T3 fibroblasts GGCTGCAGAA (2) 3.5 0.0035 E15 cortex GGCTGCAGAA (2) 4.9 0.0049 P1 cortex GGCTGCAGAA (2) 9.1 0.0091 Hypothalamus TTCTGGGCTC (5) 3.6 0.0036 Hypothalamus ACCTGCTGGG (7) 1.8 0.0018 Hypothalamus GGGGGCCCTG (11) 1.8 0.0018 E12.5 retina TTCTGGGCTC (5) 15 0.015 E12.5 retina CCAATCTTTG 7.5 0.0075 E12.5 retina GGCTGCAGAA (2) 1.9 0.0019 E14.5 retina TTCTGGGCTC (5) 7.3 0.0073 E14.5 retina GGCTGCAGAA (2) 3.6 0.0036 E14.5 retina CCAATCTTTG 1.8 0.0018 E16.5 retina TTCTGGGCTC (5) 7.2 0.0072 E16.5 retina CTAAACTGGT (3) 3.6 0.0036 E16.5 retina ACCTGCTGGG (7) 1.8 0.0018 E16.5 retina CCAATCTTTG 1.8 0.0018 E16.5 retina GGCTGCAGAA (2) 1.8 0.0018 E18.5 retina TTCTGGGCTC (5) 3.6 0.0036 E18.5 retina CCAATCTTTG 1.8 0.0018 P0.5 retina GGCTGCAGAA (2) 9.8 0.0098 P0.5 retina CCAATCTTTG 2 0.002 P0.5 retina TTCTGGGCTC (5) 2 0.002 P2.5 retina GGCTGCAGAA (2) 3.5 0.0035 P2.5 retina TTCTGGGCTC (5) 3.5 0.0035 P4.5 retina GGCTGCAGAA (2) 4 0.004 P4.5 retina CTAAACTGGT (3) 2 0.002 P4.5 retina TATGCCTGTG (4) 2 0.002 P4.5 retina TTCTGGGCTC (5) 2 0.002 P6.5 retina TTCTGGGCTC (5) 5 0.005 P6.5 retina GGCTGCAGAA (2) 1.7 0.0017 P6.5 retina TATGCCTGTG (4) 1.7 0.0017 P10.5 crx- retina GGCTGCAGAA (2) 9.3 0.0093 P10.5 crx- retina CCAATCTTTG 5.6 0.0056 P10.5 crx- retina GGGGGCCCTG (11) 3.7 0.0037 P10.5 crx- retina CTAAACTGGT (3) 1.9 0.0019 P10.5 crx+ retina GGCTGCAGAA (2) 3.8 0.0038 P10.5 crx+ retina ACCTGCTGGG (7) 1.9 0.0019 P10.5 crx+ retina CCAATCTTTG 1.9 0.0019 Adult retinal GGCTGCAGAA (2) 3.7 0.0037 Adult retinal ACCTGCTGGG (7) 1.9 0.0019 Adult retinal CCAATCTTTG 1.9 0.0019 Adult retinal GGGGGCCCTG (11) 1.9 0.0019 ONL GGCTGCAGAA (2) 5.7 0.0057