Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248254
9530075H20Rik
RIKEN cDNA 9530075H20 gene
6
319452
Mm.248254
Calu
calumenin
6
7 3.0 cM
12321
Gene Ontology
calcium ion binding
|
endoplasmic reticulum
Human Homolog
CALU[calumenin]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 99 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATGCCTTCTT (
6
)
1.6
0.0016
P8 Cb GC
ATTCCTTTTG
(
2
)
1.6
0.0016
P8 Cb GC
TCTATAGAGT
(
3
)
1.6
0.0016
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
Cb medulloblastoma
ATGCCTTCTT (
6
)
9.2
0.0092
Cb medulloblastoma
CCTGGGCACC (
5
)
2.3
0.0023
Cb medulloblastoma
GTGGGGTCAA (
4
)
2.3
0.0023
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
TCTATAGAGT
(
3
)
11.4
0.0114
P8 GC+1d culture
AGACCACTGG
(
5
)
5.7
0.0057
P8 GC+1d culture
CCTGGGCACC (
5
)
3.4
0.0034
P8 GC+1d culture
CAGAGGCAGA
(
3
)
1.1
0.0011
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TCTATAGAGT
(
3
)
12.9
0.0129
P8 GC+SHH+1d culture
CCTGGGCACC (
5
)
4.7
0.0047
P8 GC+SHH+1d culture
AGACCACTGG
(
5
)
3.5
0.0035
P8 GC+SHH+1d culture
ATGCCTTCTT (
6
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGAGGCAGA
(
3
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
3T3 fibroblasts
CCTGGGCACC (
5
)
17.5
0.0175
3T3 fibroblasts
TCTATAGAGT
(
3
)
10.5
0.0105
3T3 fibroblasts
ATGCCTTCTT (
6
)
3.5
0.0035
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
CCTGGGCACC (
5
)
14.8
0.0148
E15 cortex
ATTCCTTTTG
(
2
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
P1 cortex
ATGCCTTCTT (
6
)
4.5
0.0045
P1 cortex
GTGGGGTCAA (
4
)
4.5
0.0045
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
ATGCCTTCTT (
6
)
7.2
0.0072
Hypothalamus
CCTGGGCACC (
5
)
1.8
0.0018
Hypothalamus
TCTATAGAGT
(
3
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E12.5 retina
TCTATAGAGT
(
3
)
11.3
0.0113
E12.5 retina
AGACCACTGG
(
5
)
5.6
0.0056
E12.5 retina
CCTGGGCACC (
5
)
5.6
0.0056
E12.5 retina
ATGCCTTCTT (
6
)
3.8
0.0038
E12.5 retina
GTGGTGTTTA
(
2
)
3.8
0.0038
E12.5 retina
CAGAGGCAGA
(
3
)
1.9
0.0019
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E14.5 retina
TCTATAGAGT
(
3
)
5.5
0.0055
E14.5 retina
ATGCCTTCTT (
6
)
3.6
0.0036
E14.5 retina
AGACCACTGG
(
5
)
1.8
0.0018
E14.5 retina
CAGAGGCAGA
(
3
)
1.8
0.0018
E14.5 retina
CCTGGGCACC (
5
)
1.8
0.0018
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E16.5 retina
CCTGGGCACC (
5
)
9.1
0.0091
E16.5 retina
ATGCCTTCTT (
6
)
7.2
0.0072
E16.5 retina
TCTATAGAGT
(
3
)
7.2
0.0072
E16.5 retina
AGACCACTGG
(
5
)
3.6
0.0036
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
E18.5 retina
TCTATAGAGT
(
3
)
5.5
0.0055
E18.5 retina
AGACCACTGG
(
5
)
3.6
0.0036
E18.5 retina
ATGCCTTCTT (
6
)
3.6
0.0036
E18.5 retina
CAGAGGCAGA
(
3
)
3.6
0.0036
E18.5 retina
CCTGGGCACC (
5
)
3.6
0.0036
E18.5 retina
ATTCCTTTTG
(
2
)
1.8
0.0018
E18.5 retina
TGTGTCAAGG (
5
)
1.8
0.0018
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
AGACCACTGG
(
5
)
7.9
0.0079
P0.5 retina
TCTATAGAGT
(
3
)
5.9
0.0059
P0.5 retina
ATTCCTTTTG
(
2
)
2
0.002
P0.5 retina
CCTGGGCACC (
5
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
CCTGGGCACC (
5
)
7
0.007
P2.5 retina
AGACCACTGG
(
5
)
5.3
0.0053
P2.5 retina
ATGCCTTCTT (
6
)
3.5
0.0035
P2.5 retina
TCTATAGAGT
(
3
)
3.5
0.0035
P2.5 retina
CAGAGGCAGA
(
3
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
CCTGGGCACC (
5
)
9.9
0.0099
P4.5 retina
AGACCACTGG
(
5
)
5.9
0.0059
P4.5 retina
ATGCCTTCTT (
6
)
2
0.002
P4.5 retina
TCTATAGAGT
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
TCTATAGAGT
(
3
)
11.7
0.0117
P6.5 retina
CCTGGGCACC (
5
)
3.3
0.0033
P6.5 retina
AGACCACTGG
(
5
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
TCTATAGAGT
(
3
)
3.7
0.0037
P10.5 crx- retina
ATGCCTTCTT (
6
)
1.9
0.0019
P10.5 crx- retina
CCTGGGCACC (
5
)
1.9
0.0019
P10.5 crx- retina
GTGGTGTTTA
(
2
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
TCTATAGAGT
(
3
)
5.8
0.0058
P10.5 crx+ retina
ATGCCTTCTT (
6
)
1.9
0.0019
P10.5 crx+ retina
CAGAGGCAGA
(
3
)
1.9
0.0019
P10.5 crx+ retina
GTGGGGTCAA (
4
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AGACCACTGG
(
5
)
5.6
0.0056
Adult retinal
CCTGGGCACC (
5
)
3.7
0.0037
Adult retinal
ATGCCTTCTT (
6
)
1.9
0.0019
Adult retinal
ATTCCTTTTG
(
2
)
1.9
0.0019
Adult retinal
TGTGTCAAGG (
5
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
ONL
ATGCCTTCTT (
6
)
7.7
0.0077
ONL
AGACCACTGG
(
5
)
5.7
0.0057
ONL
TGTGTCAAGG (
5
)
3.8
0.0038
