Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248327	Clecsf9	C-type (calcium dependent, carbohydrate recognition domain) lectin, superfamily member 9	6	6 59.6 cM	56619
Gene Ontology	integral to membrane | sugar binding
Human Homolog	CLECSF9[C-type (calcium dependent, carbohydrate-recognition domain) lectin, superfamily member 9]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGGCTCAGC (3) 16.3 0.0163 P8 Cb GC AATTTTTAAA (9) 3.3 0.0033 P8 Cb GC CTGGAATTTG (3) 3.3 0.0033 P8 Cb GC GTCTTTGTGA (5) 1.6 0.0016 Cb medulloblastoma GGGGCTCAGC (3) 27.7 0.0277 Cb medulloblastoma AATTTTTAAA (9) 4.6 0.0046 Cb medulloblastoma GTCTTTGTGA (5) 2.3 0.0023 P8 GC+1d culture GGGGCTCAGC (3) 25.1 0.0251 P8 GC+1d culture ATAGATAACT (4) 1.1 0.0011 P8 GC+1d culture CTGGAATTTG (3) 1.1 0.0011 P8 GC+1d culture GTCTTTGTGA (5) 1.1 0.0011 P8 GC+SHH+1d culture GGGGCTCAGC (3) 10.5 0.0105 P8 GC+SHH+1d culture CTGGAATTTG (3) 3.5 0.0035 P8 GC+SHH+1d culture AATTTTTAAA (9) 1.2 0.0012 3T3 fibroblasts GGGGCTCAGC (3) 14 0.014 3T3 fibroblasts CTGGAATTTG (3) 7 0.007 3T3 fibroblasts GTCTTTGTGA (5) 7 0.007 E15 cortex GGGGCTCAGC (3) 9.9 0.0099 E15 cortex CTGGAATTTG (3) 4.9 0.0049 E15 cortex GGGGCTCACC (5) 4.9 0.0049 Hypothalamus GGGGCTCAGC (3) 32.6 0.0326 E12.5 retina GGGGCTCAGC (3) 26.3 0.0263 E14.5 retina GGGGCTCAGC (3) 5.5 0.0055 E14.5 retina AATTTTTAAA (9) 3.6 0.0036 E14.5 retina CTGGAATTTG (3) 1.8 0.0018 E14.5 retina GGGGCTCACC (5) 1.8 0.0018 E16.5 retina GGGGCTCAGC (3) 5.4 0.0054 E16.5 retina ATAGATAACT (4) 1.8 0.0018 E18.5 retina GGGGCTCAGC (3) 38.2 0.0382 E18.5 retina CTGGAATTTG (3) 1.8 0.0018 P0.5 retina GGGGCTCAGC (3) 23.6 0.0236 P0.5 retina CTGGAATTTG (3) 3.9 0.0039 P0.5 retina GGGGCTCACC (5) 2 0.002 P2.5 retina GGGGCTCAGC (3) 49.3 0.0493 P4.5 retina GGGGCTCAGC (3) 37.6 0.0376 P4.5 retina CTGGAATTTG (3) 2 0.002 P6.5 retina GGGGCTCAGC (3) 43.4 0.0434 P6.5 retina ATAGATAACT (4) 1.7 0.0017 P6.5 retina GGGGCTCACC (5) 1.7 0.0017 P10.5 crx- retina GGGGCTCAGC (3) 20.4 0.0204 P10.5 crx+ retina GGGGCTCAGC (3) 73.1 0.0731 Adult retinal GGGGCTCAGC (3) 51.8 0.0518 Adult retinal CTGGAATTTG (3) 3.7 0.0037 Adult retinal AATTTTTAAA (9) 1.9 0.0019 ONL GGGGCTCAGC (3) 13.4 0.0134 ONL AATTTTTAAA (9) 1.9 0.0019 ONL ATAGATAACT (4) 1.9 0.0019 ONL GGGGCTCACC (5) 1.9 0.0019