Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248440
1110007F12Rik
RIKEN cDNA 1110007F12 gene
6
68487
Human Homolog
FLJ11000[hypothetical protein FLJ11000]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 26 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TTACAACTTT
1.6
0.0016
Cb medulloblastoma
ATCCTCTTGG (
5
)
2.3
0.0023
P8 GC+1d culture
CACGTAATCA
TCTGTCTGTC (
3
)
2.2
0.0022
P8 GC+SHH+1d culture
TTACAACTTT
2.3
0.0023
3T3 fibroblasts
ATCCTCTTGG (
5
)
3.5
0.0035
E15 cortex
GAGAAGGCAC (
2
)
4.9
0.0049
P1 cortex
ATCCTCTTGG (
5
)
4.5
0.0045
Hypothalamus
CACGTAATCA
1.8
0.0018
E14.5 retina
CACGTAATCA
TTACAACTTT
3.6
0.0036
E16.5 retina
CACGTAATCA
GAGAAGGCAC (
2
)
3.6
0.0036
E18.5 retina
TTACAACTTT
1.8
0.0018
P0.5 retina
TCTGTCTGTC (
3
)
2
0.002
P2.5 retina
TCTGTCTGTC (
3
)
1.8
0.0018
P4.5 retina
GAGAAGGCAC (
2
)
TTACAACTTT
4
0.004
P6.5 retina
CACGTAATCA
TCTGTCTGTC (
3
)
3.4
0.0034
P10.5 crx- retina
ATCCTCTTGG (
5
)
TTACAACTTT
5.6
0.0056
P10.5 crx+ retina
TCTGTCTGTC (
3
)
1.9
0.0019
Adult retinal
GAGAAGGCAC (
2
)
GTCTTTATTA
(
3
)
TCTGTCTGTC (
3
)
5.7
0.0057
