Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.24848
Deb1
differentially expressed in B16F10 1
9
26901
Human Homolog
SS18L2[synovial sarcoma translocation gene on chromosome 18-like 2]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 74 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAATTAAATG
(
3
)
6.5
0.0065
P8 Cb GC
CTGCAAAAAA (
4
)
3.3
0.0033
P8 Cb GC
CCTGTAATCT (
9
)
1.6
0.0016
P8 Cb GC
TAATAAATGA
(
2
)
1.6
0.0016
Cb medulloblastoma
CTGCAAAAAA (
4
)
11.6
0.0116
Cb medulloblastoma
TAATTAAATG
(
3
)
4.6
0.0046
Cb medulloblastoma
TCTGTCATCT (
5
)
4.6
0.0046
P8 GC+1d culture
TAATTAAATG
(
3
)
6.8
0.0068
P8 GC+1d culture
CTGCAAAAAA (
4
)
3.4
0.0034
P8 GC+1d culture
TAATAAATGA
(
2
)
3.4
0.0034
P8 GC+1d culture
ACAGCAGTTT
(
4
)
2.3
0.0023
P8 GC+1d culture
GGCAAAAAGT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TAATAAATGA
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
TAATTAAATG
(
3
)
4.7
0.0047
P8 GC+SHH+1d culture
CTGCAAAAAA (
4
)
2.3
0.0023
P8 GC+SHH+1d culture
TATTAAATGA
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
GGCAAAAAGT
(
4
)
1.2
0.0012
3T3 fibroblasts
CCTGTAATCT (
9
)
10.5
0.0105
3T3 fibroblasts
GTCATAGCTG (
590
)
10.5
0.0105
E15 cortex
GTCATAGCTG (
590
)
4.9
0.0049
P1 cortex
TAATTAAATG
(
3
)
9.1
0.0091
Hypothalamus
TAATAAATGA
(
2
)
12.7
0.0127
Hypothalamus
CTGCAAAAAA (
4
)
5.4
0.0054
Hypothalamus
TAATTAAATG
(
3
)
3.6
0.0036
Hypothalamus
GGCAAAAAGT
(
4
)
1.8
0.0018
Hypothalamus
TAATAAATGG (
3
)
1.8
0.0018
E12.5 retina
CTGCAAAAAA (
4
)
3.8
0.0038
E12.5 retina
TAATAAATGA
(
2
)
3.8
0.0038
E14.5 retina
TAATAAATGA
(
2
)
18.2
0.0182
E14.5 retina
TATTAAATGA
(
2
)
7.3
0.0073
E14.5 retina
TAATTAAATG
(
3
)
3.6
0.0036
E14.5 retina
TTAATAAATG (
3
)
3.6
0.0036
E16.5 retina
TAATAAATGA
(
2
)
9.1
0.0091
E16.5 retina
TAATTAAATG
(
3
)
3.6
0.0036
E18.5 retina
TAATAAATGA
(
2
)
20
0.02
E18.5 retina
TTAATAAATG (
3
)
9.1
0.0091
E18.5 retina
CTGCAAAAAA (
4
)
3.6
0.0036
E18.5 retina
TAATTAAATG
(
3
)
3.6
0.0036
E18.5 retina
TATTAAATGA
(
2
)
3.6
0.0036
P0.5 retina
CCTGTAATCT (
9
)
3.9
0.0039
P0.5 retina
CTGCAAAAAA (
4
)
3.9
0.0039
P0.5 retina
GTCATAGCTG (
590
)
3.9
0.0039
P0.5 retina
TAATTAAATG
(
3
)
2
0.002
P2.5 retina
TAATAAATGA
(
2
)
5.3
0.0053
P2.5 retina
TAATTAAATG
(
3
)
5.3
0.0053
P2.5 retina
ACAGCAGTTT
(
4
)
1.8
0.0018
P2.5 retina
GTCATAGCTG (
590
)
1.8
0.0018
P2.5 retina
TTAATAAATG (
3
)
1.8
0.0018
P4.5 retina
TAATAAATGA
(
2
)
7.9
0.0079
P4.5 retina
TAATTAAATG
(
3
)
5.9
0.0059
P4.5 retina
CTGCAAAAAA (
4
)
4
0.004
P4.5 retina
CCTGTAATCT (
9
)
2
0.002
P4.5 retina
GTCATAGCTG (
590
)
2
0.002
P6.5 retina
TAATAAATGA
(
2
)
8.3
0.0083
P6.5 retina
GTCATAGCTG (
590
)
3.3
0.0033
P6.5 retina
TAATTAAATG
(
3
)
3.3
0.0033
P6.5 retina
CTGCAAAAAA (
4
)
1.7
0.0017
P6.5 retina
GGCAAAAAGT
(
4
)
1.7
0.0017
P6.5 retina
TTAATAAATG (
3
)
1.7
0.0017
P10.5 crx- retina
TAATAAATGA
(
2
)
3.7
0.0037
P10.5 crx- retina
TATTAAATGA
(
2
)
3.7
0.0037
P10.5 crx- retina
TAATTAAATG
(
3
)
1.9
0.0019
P10.5 crx- retina
TCTGTCATCT (
5
)
1.9
0.0019
P10.5 crx+ retina
TAATAAATGA
(
2
)
5.8
0.0058
P10.5 crx+ retina
CCTGTAATCT (
9
)
1.9
0.0019
P10.5 crx+ retina
CTGCAAAAAA (
4
)
1.9
0.0019
Adult retinal
TAATAAATGA
(
2
)
5.6
0.0056
Adult retinal
CTGCAAAAAA (
4
)
1.9
0.0019
Adult retinal
GTCATAGCTG (
590
)
1.9
0.0019
ONL
GTCATAGCTG (
590
)
5.7
0.0057
ONL
CTGCAAAAAA (
4
)
3.8
0.0038
ONL
TAATAAATGA
(
2
)
3.8
0.0038
ONL
TAATAAATGG (
3
)
3.8
0.0038
ONL
TTAATAAATG (
3
)
1.9
0.0019
