Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248504
Ttc17
tetratricopeptide repeat domain 17
2
2 52.0 cM
74569
Human Homolog
TTC17[tetratricopeptide repeat domain 17]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 34 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
6.5
0.0065
Cb medulloblastoma
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
9.2
0.0092
P8 GC+1d culture
CTTTTCAGCA (
5
)
19.4
0.0194
P8 GC+SHH+1d culture
CTTTTCAGCA (
5
)
TGCAACATCT
15.3
0.0153
3T3 fibroblasts
CTTTTCAGCA (
5
)
14
0.014
E15 cortex
CTTTTCAGCA (
5
)
TGTGTACACA
19.7
0.0197
P1 cortex
CTTTTCAGCA (
5
)
22.7
0.0227
Hypothalamus
CTTTTCAGCA (
5
)
10.9
0.0109
E12.5 retina
CTTTTCAGCA (
5
)
15
0.015
E14.5 retina
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
10.9
0.0109
E16.5 retina
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
TGTGTACACA
12.6
0.0126
E18.5 retina
CTTTTCAGCA (
5
)
TGTGTACACA
9.1
0.0091
P0.5 retina
CTTTTCAGCA (
5
)
9.8
0.0098
P2.5 retina
CTTTTCAGCA (
5
)
8.8
0.0088
P4.5 retina
CTTTTCAGCA (
5
)
TGTGTACACA
11.8
0.0118
P6.5 retina
CTTTTCAGCA (
5
)
6.7
0.0067
P10.5 crx- retina
CTTTTCAGCA (
5
)
TGCAACATCT
9.3
0.0093
P10.5 crx+ retina
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
TGTGTACACA
15.3
0.0153
Adult retinal
CTTTTCAGCA (
5
)
GCAGCCCTCT (
2
)
TGCAACATCT
26
0.026
ONL
CTTTTCAGCA (
5
)
19.2
0.0192
