Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248635
Brp17
brain protein 17
1
56695
Mm.248635
D1Ertd408e
DNA segment, Chr 1, ERATO Doi 408, expressed
1
1 41.0 cM
52326
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 68 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CAGGCAAAAC (
40
)
11.4
0.0114
P8 Cb GC
GCTATGCTAT (
7
)
1.6
0.0016
P8 Cb GC
GCTCCTGAGG
(
3
)
1.6
0.0016
Cb medulloblastoma
GCTCCTGAGG
(
3
)
9.2
0.0092
Cb medulloblastoma
CAGGCAAAAC (
40
)
4.6
0.0046
Cb medulloblastoma
GACTGAATTT
(
3
)
2.3
0.0023
Cb medulloblastoma
GACTGTATCT
(
2
)
2.3
0.0023
P8 GC+1d culture
CAGGCAAAAC (
40
)
5.7
0.0057
P8 GC+1d culture
GCTCCTGAGG
(
3
)
3.4
0.0034
P8 GC+1d culture
GACTGTATCT
(
2
)
2.3
0.0023
P8 GC+SHH+1d culture
CAGGCAAAAC (
40
)
11.7
0.0117
P8 GC+SHH+1d culture
GCTCCTGAGG
(
3
)
9.4
0.0094
P8 GC+SHH+1d culture
GCTATGCTAT (
7
)
5.9
0.0059
P8 GC+SHH+1d culture
GACTGTATCT
(
2
)
1.2
0.0012
3T3 fibroblasts
CAGGCAAAAC (
40
)
10.5
0.0105
3T3 fibroblasts
GCTCCTGAGG
(
3
)
7
0.007
3T3 fibroblasts
GCCAAGGCAA (
9
)
3.5
0.0035
E15 cortex
CAGGCAAAAC (
40
)
4.9
0.0049
E15 cortex
GACTGTATCT
(
2
)
4.9
0.0049
P1 cortex
CAGGCAAAAC (
40
)
9.1
0.0091
P1 cortex
GACTGTATCT
(
2
)
4.5
0.0045
P1 cortex
GCTCCTGAGG
(
3
)
4.5
0.0045
Hypothalamus
CAGGCAAAAC (
40
)
5.4
0.0054
Hypothalamus
GCTCCTGAGG
(
3
)
5.4
0.0054
E12.5 retina
CAGGCAAAAC (
40
)
20.7
0.0207
E12.5 retina
GCTCCTGAGG
(
3
)
3.8
0.0038
E14.5 retina
CAGGCAAAAC (
40
)
12.8
0.0128
E14.5 retina
GCTCCTGAGG
(
3
)
5.5
0.0055
E16.5 retina
CAGGCAAAAC (
40
)
9.1
0.0091
E16.5 retina
GCTATGCTAT (
7
)
7.2
0.0072
E16.5 retina
GCTCCTGAGG
(
3
)
5.4
0.0054
E16.5 retina
GACTGTATCT
(
2
)
1.8
0.0018
E18.5 retina
CAGGCAAAAC (
40
)
12.7
0.0127
E18.5 retina
GCTATGCTAT (
7
)
3.6
0.0036
E18.5 retina
GACTGAATTT
(
3
)
1.8
0.0018
E18.5 retina
GACTGTATCT
(
2
)
1.8
0.0018
E18.5 retina
GCCAAGGCAA (
9
)
1.8
0.0018
P0.5 retina
CAGGCAAAAC (
40
)
13.7
0.0137
P0.5 retina
GCTCCTGAGG
(
3
)
3.9
0.0039
P2.5 retina
CAGGCAAAAC (
40
)
24.6
0.0246
P2.5 retina
GACTGTATCT
(
2
)
5.3
0.0053
P2.5 retina
GCTCCTGAGG
(
3
)
5.3
0.0053
P2.5 retina
GCTATGCTAT (
7
)
3.5
0.0035
P2.5 retina
GCCAAGGCAA (
9
)
1.8
0.0018
P4.5 retina
CAGGCAAAAC (
40
)
13.9
0.0139
P4.5 retina
GCTCCTGAGG
(
3
)
5.9
0.0059
P4.5 retina
GACTGAATTT
(
3
)
2
0.002
P4.5 retina
GACTGTATCT
(
2
)
2
0.002
P4.5 retina
GCTATGCTAT (
7
)
2
0.002
P6.5 retina
CAGGCAAAAC (
40
)
16.7
0.0167
P6.5 retina
GACTGTATCT
(
2
)
5
0.005
P6.5 retina
GCTCCTGAGG
(
3
)
5
0.005
P6.5 retina
GCTATGCTAT (
7
)
1.7
0.0017
P10.5 crx- retina
GCTCCTGAGG
(
3
)
14.9
0.0149
P10.5 crx- retina
CAGGCAAAAC (
40
)
11.1
0.0111
P10.5 crx- retina
GCTATGCTAT (
7
)
3.7
0.0037
P10.5 crx- retina
GACTGTATCT
(
2
)
1.9
0.0019
P10.5 crx+ retina
CAGGCAAAAC (
40
)
13.5
0.0135
P10.5 crx+ retina
GCTATGCTAT (
7
)
7.7
0.0077
P10.5 crx+ retina
GCTCCTGAGG
(
3
)
5.8
0.0058
P10.5 crx+ retina
GACTGAATTT
(
3
)
3.8
0.0038
P10.5 crx+ retina
GACTGTATCT
(
2
)
3.8
0.0038
Adult retinal
CAGGCAAAAC (
40
)
11.1
0.0111
Adult retinal
GCCAAGGCAA (
9
)
1.9
0.0019
ONL
CAGGCAAAAC (
40
)
34.5
0.0345
ONL
GCCAAGGCAA (
9
)
3.8
0.0038
ONL
GCTCCTGAGG
(
3
)
3.8
0.0038
ONL
GCTATGCTAT (
7
)
1.9
0.0019
