Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248656
AA673488
expressed sequence AA673488
7
101471
Human Homolog
KIAA1542[CTD-binding SR-like protein rA9]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 36 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
GTACCTGTCT
(
4
)
3.3
0.0033
P8 Cb GC
TCTGAAAAAA (
10
)
3.3
0.0033
Cb medulloblastoma
TCTGAAAAAA (
10
)
16.2
0.0162
Cb medulloblastoma
GCATTAGCAT (
2
)
2.3
0.0023
Cb medulloblastoma
GTACCTGTCT
(
4
)
2.3
0.0023
P8 GC+1d culture
GTACCTGTCT
(
4
)
4.6
0.0046
P8 GC+1d culture
TCTGAAAAAA (
10
)
4.6
0.0046
P8 GC+1d culture
GCATTAGCAT (
2
)
1.1
0.0011
P8 GC+SHH+1d culture
TCTGAAAAAA (
10
)
4.7
0.0047
P8 GC+SHH+1d culture
GCATTAGCAT (
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GTACCTGTCT
(
4
)
1.2
0.0012
E15 cortex
GTACCTGTCT
(
4
)
4.9
0.0049
E15 cortex
TCTGAAAAAA (
10
)
4.9
0.0049
Hypothalamus
GCATTAGCAT (
2
)
7.2
0.0072
Hypothalamus
TCTGAAAAAA (
10
)
5.4
0.0054
Hypothalamus
GTACCTGTCT
(
4
)
1.8
0.0018
E12.5 retina
TCTGAAAAAA (
10
)
5.6
0.0056
E12.5 retina
GTACCTGTCT
(
4
)
1.9
0.0019
E14.5 retina
TCTGAAAAAA (
10
)
3.6
0.0036
E14.5 retina
GTACCTGTCT
(
4
)
1.8
0.0018
E16.5 retina
TCTGAAAAAA (
10
)
5.4
0.0054
E16.5 retina
GCATTAGCAT (
2
)
3.6
0.0036
E18.5 retina
TCTGAAAAAA (
10
)
9.1
0.0091
E18.5 retina
GTACCTGTCT
(
4
)
5.5
0.0055
P2.5 retina
GTACCTGTCT
(
4
)
7
0.007
P2.5 retina
TCTGAAAAAA (
10
)
3.5
0.0035
P4.5 retina
GTACCTGTCT
(
4
)
9.9
0.0099
P6.5 retina
GTACCTGTCT
(
4
)
3.3
0.0033
P6.5 retina
GCATTAGCAT (
2
)
1.7
0.0017
P10.5 crx- retina
TCTGAAAAAA (
10
)
5.6
0.0056
P10.5 crx- retina
GCATTAGCAT (
2
)
3.7
0.0037
P10.5 crx- retina
GTACCTGTCT
(
4
)
1.9
0.0019
P10.5 crx+ retina
GCATTAGCAT (
2
)
1.9
0.0019
P10.5 crx+ retina
TCTGAAAAAA (
10
)
1.9
0.0019
Adult retinal
TCTGAAAAAA (
10
)
1.9
0.0019
ONL
GTACCTGTCT
(
4
)
1.9
0.0019
