Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248820
6230400G14Rik
RIKEN cDNA 6230400G14 gene
6
76124
Mm.248820
Prickle2
prickle-like 2 (Drosophila)
6
243548
Human Homolog
PRICKLE2[prickle-like 2 (Drosophila)]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 50 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TCAAAAAAAA (
60
)
17.9
0.0179
P8 Cb GC
GCTGGCCTCT
(
8
)
3.3
0.0033
Cb medulloblastoma
TCAAAAAAAA (
60
)
99.4
0.0994
Cb medulloblastoma
GCCACCAATC
(
2
)
2.3
0.0023
P8 GC+1d culture
TCAAAAAAAA (
60
)
17.1
0.0171
P8 GC+1d culture
GCTGGCCTCT
(
8
)
2.3
0.0023
P8 GC+1d culture
GAGACATTTC (
5
)
1.1
0.0011
P8 GC+SHH+1d culture
TCAAAAAAAA (
60
)
51.5
0.0515
P8 GC+SHH+1d culture
GCTGGCCTCT
(
8
)
2.3
0.0023
P8 GC+SHH+1d culture
TCAGGCTGGG
(
3
)
1.2
0.0012
3T3 fibroblasts
TCAAAAAAAA (
60
)
7
0.007
E15 cortex
TCAAAAAAAA (
60
)
14.8
0.0148
E15 cortex
GCTGGCCTCT
(
8
)
4.9
0.0049
P1 cortex
TCAAAAAAAA (
60
)
22.7
0.0227
Hypothalamus
TCAAAAAAAA (
60
)
39.8
0.0398
Hypothalamus
GCCACCAATC
(
2
)
3.6
0.0036
E12.5 retina
TCAAAAAAAA (
60
)
18.8
0.0188
E12.5 retina
GCTGGCCTCT
(
8
)
5.6
0.0056
E14.5 retina
TCAAAAAAAA (
60
)
41.9
0.0419
E14.5 retina
GAGACATTTC (
5
)
1.8
0.0018
E14.5 retina
GCCACCAATC
(
2
)
1.8
0.0018
E14.5 retina
GCTGGCCTCT
(
8
)
1.8
0.0018
E14.5 retina
TCAGGCTGGG
(
3
)
1.8
0.0018
E16.5 retina
TCAAAAAAAA (
60
)
18.1
0.0181
E16.5 retina
GCTGGCCTCT
(
8
)
1.8
0.0018
E18.5 retina
TCAAAAAAAA (
60
)
49.1
0.0491
E18.5 retina
GCTGGCCTCT
(
8
)
1.8
0.0018
P0.5 retina
TCAAAAAAAA (
60
)
31.4
0.0314
P0.5 retina
TCAGGCTGGG
(
3
)
3.9
0.0039
P0.5 retina
GCTGGCCTCT
(
8
)
2
0.002
P2.5 retina
TCAAAAAAAA (
60
)
35.2
0.0352
P2.5 retina
GAGACATTTC (
5
)
8.8
0.0088
P2.5 retina
TCAGGCTGGG
(
3
)
1.8
0.0018
P4.5 retina
TCAAAAAAAA (
60
)
37.6
0.0376
P4.5 retina
GAGACATTTC (
5
)
15.9
0.0159
P6.5 retina
TCAAAAAAAA (
60
)
31.7
0.0317
P6.5 retina
GAGACATTTC (
5
)
26.7
0.0267
P10.5 crx- retina
TCAAAAAAAA (
60
)
14.9
0.0149
P10.5 crx- retina
GAGACATTTC (
5
)
9.3
0.0093
P10.5 crx- retina
GCTGGCCTCT
(
8
)
5.6
0.0056
P10.5 crx+ retina
TCAAAAAAAA (
60
)
17.3
0.0173
P10.5 crx+ retina
GAGACATTTC (
5
)
7.7
0.0077
P10.5 crx+ retina
TCAGGCTGGG
(
3
)
1.9
0.0019
Adult retinal
TCAAAAAAAA (
60
)
20.4
0.0204
Adult retinal
GAGACATTTC (
5
)
11.1
0.0111
Adult retinal
GCCACCAATC
(
2
)
1.9
0.0019
Adult retinal
GCTGGCCTCT
(
8
)
1.9
0.0019
ONL
TCAAAAAAAA (
60
)
15.3
0.0153
ONL
GCTGGCCTCT
(
8
)
7.7
0.0077
ONL
GAGACATTTC (
5
)
5.7
0.0057
