Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.248843	2510010K19Rik	RIKEN cDNA 2510010K19 gene	11		78332
Mm.248843	3110040D16Rik	RIKEN cDNA 3110040D16 gene	11		73158
Gene Ontology	biological_process unknown | cytoplasm | molecular_function unknown
Human Homolog	LARP[likely ortholog of mouse la related protein]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCCTTCTGCC (2) 4.9 0.0049 P8 Cb GC TATTGGCTCC (3) 3.3 0.0033 P8 Cb GC CAACTCAGTC (2) 1.6 0.0016 P8 Cb GC CTGAGGAGGG (7) 1.6 0.0016 P8 Cb GC GAGGTGGAGA (9) 1.6 0.0016 Cb medulloblastoma TATTGGCTCC (3) 9.2 0.0092 Cb medulloblastoma CCCTTCTGCC (2) 2.3 0.0023 Cb medulloblastoma GAGGTGGAGA (9) 2.3 0.0023 Cb medulloblastoma TGCTAGGATA (2) 2.3 0.0023 P8 GC+1d culture TATTGGCTCC (3) 5.7 0.0057 P8 GC+1d culture TGCTAGGATA (2) 5.7 0.0057 P8 GC+1d culture CCCTTCTGCC (2) 1.1 0.0011 P8 GC+1d culture GCTGGAGGAG (9) 1.1 0.0011 P8 GC+1d culture GGCGAGGAAG (7) 1.1 0.0011 P8 GC+SHH+1d culture TATTGGCTCC (3) 2.3 0.0023 P8 GC+SHH+1d culture TGCTAGGATA (2) 2.3 0.0023 E15 cortex CCCTTCTGCC (2) 4.9 0.0049 E15 cortex TATTGGCTCC (3) 4.9 0.0049 E15 cortex TGCTAGGATA (2) 4.9 0.0049 P1 cortex CCCTTCTGCC (2) 4.5 0.0045 P1 cortex TATTGGCTCC (3) 4.5 0.0045 Hypothalamus TATTGGCTCC (3) 7.2 0.0072 Hypothalamus CAACTCAGTC (2) 1.8 0.0018 Hypothalamus GCTGGAGGAG (9) 1.8 0.0018 Hypothalamus TGCTAGGATA (2) 1.8 0.0018 E12.5 retina CCCTTCTGCC (2) 1.9 0.0019 E12.5 retina GAGGTGGAGA (9) 1.9 0.0019 E12.5 retina TATTGGCTCC (3) 1.9 0.0019 E12.5 retina TGCTAGGATA (2) 1.9 0.0019 E14.5 retina TGCTAGGATA (2) 5.5 0.0055 E16.5 retina CCCTTCTGCC (2) 3.6 0.0036 E16.5 retina TATTGGCTCC (3) 3.6 0.0036 E16.5 retina CTGAGGAGGG (7) 1.8 0.0018 E16.5 retina TGCTAGGATA (2) 1.8 0.0018 E18.5 retina TATTGGCTCC (3) 3.6 0.0036 E18.5 retina CCCTTCTGCC (2) 1.8 0.0018 E18.5 retina CTGAGGAGGG (7) 1.8 0.0018 E18.5 retina GAGGTGGAGA (9) 1.8 0.0018 E18.5 retina TGCTAGGATA (2) 1.8 0.0018 P0.5 retina CCCTTCTGCC (2) 7.9 0.0079 P0.5 retina CAACTCAGTC (2) 2 0.002 P2.5 retina TATTGGCTCC (3) 3.5 0.0035 P2.5 retina TGCTAGGATA (2) 3.5 0.0035 P4.5 retina TATTGGCTCC (3) 5.9 0.0059 P6.5 retina GGCGAGGAAG (7) 10 0.01 P6.5 retina TATTGGCTCC (3) 3.3 0.0033 P6.5 retina CCCTTCTGCC (2) 1.7 0.0017 P10.5 crx- retina TATTGGCTCC (3) 9.3 0.0093 P10.5 crx- retina GGCGAGGAAG (7) 7.4 0.0074 P10.5 crx- retina GCTGGAGGAG (9) 3.7 0.0037 P10.5 crx- retina TGCTAGGATA (2) 3.7 0.0037 P10.5 crx- retina CCCTTCTGCC (2) 1.9 0.0019 P10.5 crx+ retina TATTGGCTCC (3) 7.7 0.0077 P10.5 crx+ retina GGCGAGGAAG (7) 1.9 0.0019 Adult retinal GGCGAGGAAG (7) 9.3 0.0093 Adult retinal GAGGTGGAGA (9) 1.9 0.0019 Adult retinal TGCTAGGATA (2) 1.9 0.0019 ONL TATTGGCTCC (3) 3.8 0.0038 ONL GGCGAGGAAG (7) 1.9 0.0019