Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248906
A930031G03Rik
RIKEN cDNA A930031G03 gene
15
77821
Mm.248906
Sca10
spinocerebellar ataxia 10 homolog (human)
15
54138
Mm.248906
C77170
expressed sequence C77170
15
97949
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 35 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TAGGGTACAG
(
3
)
19.6
0.0196
P8 Cb GC
ATTTCTGTTC
(
4
)
1.6
0.0016
P8 GC+1d culture
TAGGGTACAG
(
3
)
21.7
0.0217
P8 GC+SHH+1d culture
TAGGGTACAG
(
3
)
31.6
0.0316
P8 GC+SHH+1d culture
TGAACGGGGC
(
3
)
1.2
0.0012
3T3 fibroblasts
TAGGGTACAG
(
3
)
14
0.014
E15 cortex
TAGGGTACAG
(
3
)
4.9
0.0049
P1 cortex
TAGGGTACAG
(
3
)
18.2
0.0182
P1 cortex
TGAACGGGGC
(
3
)
13.6
0.0136
Hypothalamus
TAGGGTACAG
(
3
)
5.4
0.0054
E12.5 retina
TAGGGTACAG
(
3
)
11.3
0.0113
E12.5 retina
TCCAATACTT
(
3
)
1.9
0.0019
E12.5 retina
TGAACGGGGC
(
3
)
1.9
0.0019
E14.5 retina
TAGGGTACAG
(
3
)
14.6
0.0146
E14.5 retina
ATTTCTGTTC
(
4
)
3.6
0.0036
E14.5 retina
TCCAATACTT
(
3
)
1.8
0.0018
E14.5 retina
TGAACGGGGC
(
3
)
1.8
0.0018
E16.5 retina
TAGGGTACAG
(
3
)
12.7
0.0127
E16.5 retina
TCCAATACTT
(
3
)
1.8
0.0018
E18.5 retina
TAGGGTACAG
(
3
)
7.3
0.0073
E18.5 retina
ATTTCTGTTC
(
4
)
1.8
0.0018
P0.5 retina
TAGGGTACAG
(
3
)
11.8
0.0118
P2.5 retina
TAGGGTACAG
(
3
)
10.6
0.0106
P2.5 retina
TGAACGGGGC
(
3
)
5.3
0.0053
P2.5 retina
TCCAATACTT
(
3
)
1.8
0.0018
P4.5 retina
TAGGGTACAG
(
3
)
9.9
0.0099
P6.5 retina
TAGGGTACAG
(
3
)
11.7
0.0117
P6.5 retina
TAGGGTACAA
(
3
)
1.7
0.0017
P10.5 crx- retina
TAGGGTACAG
(
3
)
20.4
0.0204
P10.5 crx- retina
TAGGGTACAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
TAGGGTACAG
(
3
)
9.6
0.0096
Adult retinal
TAGGGTACAG
(
3
)
3.7
0.0037
Adult retinal
ATTTCTGTTC
(
4
)
1.9
0.0019
Adult retinal
TGAACGGGGC
(
3
)
1.9
0.0019
ONL
TAGGGTACAG
(
3
)
3.8
0.0038
