Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.248960
5530601I19Rik
RIKEN cDNA 5530601I19 gene
7
71448
Human Homolog
LOC283232[hypothetical protein LOC283232]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 43 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TGGTTGCTGG (
369
)
68.5
0.0685
Cb medulloblastoma
TGGTTGCTGG (
369
)
113.3
0.1133
P8 GC+1d culture
TGGTTGCTGG (
369
)
57.1
0.0571
P8 GC+1d culture
GGTGGGGGTT
(
4
)
1.1
0.0011
P8 GC+SHH+1d culture
TGGTTGCTGG (
369
)
89
0.089
3T3 fibroblasts
TGGTTGCTGG (
369
)
220.8
0.2208
3T3 fibroblasts
GGTGGGGGTT
(
4
)
3.5
0.0035
E15 cortex
TGGTTGCTGG (
369
)
277.1
0.2771
E15 cortex
GGTGGGGGTT
(
4
)
9.9
0.0099
E15 cortex
GCTTCCTGGC
(
3
)
4.9
0.0049
P1 cortex
TGGTTGCTGG (
369
)
86.4
0.0864
Hypothalamus
TGGTTGCTGG (
369
)
349.6
0.3496
Hypothalamus
GGTGGGGGTT
(
4
)
3.6
0.0036
Hypothalamus
AATCAGAATA
(
2
)
1.8
0.0018
Hypothalamus
GACAGGAGCC (
5
)
1.8
0.0018
Hypothalamus
GCAGGAGGCC
(
2
)
1.8
0.0018
E12.5 retina
TGGTTGCTGG (
369
)
157.7
0.1577
E12.5 retina
AATCAGAATA
(
2
)
1.9
0.0019
E14.5 retina
TGGTTGCTGG (
369
)
936.5
0.9365
E14.5 retina
GGTGGGGGTT
(
4
)
1.8
0.0018
E16.5 retina
TGGTTGCTGG (
369
)
767.9
0.7679
E16.5 retina
GACAGGAGCC (
5
)
3.6
0.0036
E16.5 retina
GGTGGGGGTT
(
4
)
3.6
0.0036
E18.5 retina
TGGTTGCTGG (
369
)
252.8
0.2528
E18.5 retina
GACAGGAGCC (
5
)
1.8
0.0018
P0.5 retina
TGGTTGCTGG (
369
)
190.4
0.1904
P0.5 retina
GCTTCCTGGC
(
3
)
2
0.002
P0.5 retina
GGTGGGGGTT
(
4
)
2
0.002
P2.5 retina
TGGTTGCTGG (
369
)
165.4
0.1654
P4.5 retina
TGGTTGCTGG (
369
)
150.6
0.1506
P4.5 retina
GGTGGGGGTT
(
4
)
4
0.004
P6.5 retina
TGGTTGCTGG (
369
)
156.7
0.1567
P6.5 retina
GCAGGAGGCC
(
2
)
3.3
0.0033
P6.5 retina
GGTGGGGGTT
(
4
)
1.7
0.0017
P10.5 crx- retina
TGGTTGCTGG (
369
)
280.5
0.2805
P10.5 crx- retina
GGTGGGGGTT
(
4
)
1.9
0.0019
P10.5 crx+ retina
TGGTTGCTGG (
369
)
101.9
0.1019
P10.5 crx+ retina
GACAGGAGCC (
5
)
1.9
0.0019
Adult retinal
TGGTTGCTGG (
369
)
214.8
0.2148
Adult retinal
GGTGGGGGTT
(
4
)
5.6
0.0056
Adult retinal
GCTTCCTGGC
(
3
)
3.7
0.0037
Adult retinal
GCAGGAGGCC
(
2
)
1.9
0.0019
ONL
TGGTTGCTGG (
369
)
398.4
0.3984
