Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249096	Atp6v1b2	ATPase, H+ transporting, V1 subunit B, isoform 2	8	8 B3.3	11966
Gene Ontology	ATP binding | ATP biosynthesis | ATP synthesis coupled proton transport | ATP-binding and phosphorylation-dependent chloride channel activity | cytoplasm | energy coupled proton transport, against electrochemical gradient | hydrogen ion transporter activity | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | hydrogen-transporting ATP synthase activity, rotational mechanism | hydrogen-transporting ATPase activity, rotational mechanism | hydrolase activity | proton transport | proton-transporting two-sector ATPase complex
Human Homolog	ATP6V1B2[ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B, isoform 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 4 In Situ Hybridization Images

Images -- Click to Enlarge

SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATTATATTTT 3.3 0.0033 P8 Cb GC ACAGCCGTGG (5) 1.6 0.0016 P8 Cb GC GATATCATCA (2) 1.6 0.0016 P8 Cb GC GGGTCAGCCC (3) 1.6 0.0016 Cb medulloblastoma ATTATATTTT 2.3 0.0023 Cb medulloblastoma GAAAAACCGC (2) 2.3 0.0023 Cb medulloblastoma GTAGAGGCAC (2) 2.3 0.0023 P8 GC+1d culture ATTATATTTT 10.3 0.0103 P8 GC+1d culture GATATCATCA (2) 5.7 0.0057 P8 GC+1d culture ACAGCCGTGG (5) 1.1 0.0011 P8 GC+1d culture GTAGAGGCAC (2) 1.1 0.0011 P8 GC+1d culture TATGTGGACT (9) 1.1 0.0011 P8 GC+SHH+1d culture ATTATATTTT 5.9 0.0059 P8 GC+SHH+1d culture GATATCATCA (2) 3.5 0.0035 P8 GC+SHH+1d culture ACAGCCGTGG (5) 2.3 0.0023 P8 GC+SHH+1d culture TATGTGGACT (9) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts GATATCATCA (2) 7 0.007 E15 cortex GGGTCAGCCC (3) 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex ATTATATTTT 4.5 0.0045 Hypothalamus ATTATATTTT 5.4 0.0054 Hypothalamus GATATCATCA (2) 5.4 0.0054 Hypothalamus TGCCACAAGA 5.4 0.0054 Hypothalamus CTGACCCCCC 3.6 0.0036 Hypothalamus GAAAAACCGC (2) 1.8 0.0018 Hypothalamus GGGTCAGCCC (3) 1.8 0.0018 E12.5 retina GATATCATCA (2) 5.6 0.0056 E12.5 retina ACAGCCGTGG (5) 1.9 0.0019 E14.5 retina GATATCATCA (2) 3.6 0.0036 E14.5 retina ATTATATTTT 1.8 0.0018 E14.5 retina GAAAAACCGC (2) 1.8 0.0018 E14.5 retina GAAACCAGGC (5) 1.8 0.0018 E16.5 retina GATATCATCA (2) 7.2 0.0072 E16.5 retina GAAACCAGGC (5) 1.8 0.0018 E16.5 retina GTAGAGGCAC (2) 1.8 0.0018 E16.5 retina TATGTGGACT (9) 1.8 0.0018 E16.5 retina TGCCACAAGA 1.8 0.0018 E18.5 retina GATATCATCA (2) 7.3 0.0073 E18.5 retina ACAGCCGTGG (5) 3.6 0.0036 E18.5 retina ATTATATTTT 3.6 0.0036 E18.5 retina CTGACCCCCC 1.8 0.0018 E18.5 retina GAAAAACCGC (2) 1.8 0.0018 E18.5 retina GCCTGCCCTT (5) 1.8 0.0018 P0.5 retina ACAGCCGTGG (5) 9.8 0.0098 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina GATATCATCA (2) 2 0.002 P2.5 retina GATATCATCA (2) 5.3 0.0053 P2.5 retina ACAGCCGTGG (5) 3.5 0.0035 P2.5 retina GCCTGCCCTT (5) 1.8 0.0018 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P4.5 retina ATTATATTTT 7.9 0.0079 P4.5 retina GAAAAACCGC (2) 2 0.002 P4.5 retina GAAACCAGGC (5) 2 0.002 P4.5 retina GATATCATCA (2) 2 0.002 P4.5 retina GTCATAGCTG (590) 2 0.002 P6.5 retina ATTATATTTT 11.7 0.0117 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P6.5 retina GATATCATCA (2) 1.7 0.0017 P6.5 retina TATGTGGACT (9) 1.7 0.0017 P10.5 crx- retina GATATCATCA (2) 3.7 0.0037 P10.5 crx- retina ATTATATTTT 1.9 0.0019 P10.5 crx- retina TGCCACAAGA 1.9 0.0019 P10.5 crx+ retina ATTATATTTT 7.7 0.0077 P10.5 crx+ retina GATATCATCA (2) 3.8 0.0038 P10.5 crx+ retina GAAACCAGGC (5) 1.9 0.0019 Adult retinal GATATCATCA (2) 5.6 0.0056 Adult retinal GTAGAGGCAC (2) 3.7 0.0037 Adult retinal ATTATATTTT 1.9 0.0019 Adult retinal GCCTGCCCTT (5) 1.9 0.0019 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL ATTATATTTT 7.7 0.0077 ONL GTCATAGCTG (590) 5.7 0.0057 ONL ACAGCCGTGG (5) 1.9 0.0019 ONL GATATCATCA (2) 1.9 0.0019