Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249110	Snrpe	small nuclear ribonucleoprotein E	1		20643
Gene Ontology	mRNA processing | nuclear mRNA splicing, via spliceosome | nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | RNA binding | small nucleolar ribonucleoprotein complex | spliceosome complex
Human Homolog	SNRPE[small nuclear ribonucleoprotein polypeptide E]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 48 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CTAAAAGGAG 26.1 0.0261 P8 Cb GC GTGGAAGTCA (3) 1.6 0.0016 Cb medulloblastoma CTAAAAGGAG 2.3 0.0023 P8 GC+1d culture CTAAAAGGAG 13.7 0.0137 P8 GC+1d culture GTAGAAGGAG (12) 1.1 0.0011 P8 GC+1d culture GTGGAAGTCA (3) 1.1 0.0011 P8 GC+SHH+1d culture CTAAAAGGAG 14.1 0.0141 P8 GC+SHH+1d culture TACTCATCAA 2.3 0.0023 P8 GC+SHH+1d culture GCGTACCGCG 1.2 0.0012 P8 GC+SHH+1d culture GTGGAAGTCA (3) 1.2 0.0012 3T3 fibroblasts GTCATAGCTG (590) 10.5 0.0105 3T3 fibroblasts CTAAAAGGAG 7 0.007 E15 cortex CTAAAAGGAG 4.9 0.0049 E15 cortex GTCATAGCTG (590) 4.9 0.0049 P1 cortex CTAAAAGGAG 4.5 0.0045 P1 cortex TACTCATCAA 4.5 0.0045 Hypothalamus CTAAAAGGAG 1.8 0.0018 Hypothalamus GCGTACCGCG 1.8 0.0018 E12.5 retina CTAAAAGGAG 35.7 0.0357 E12.5 retina GTGGAAGTCA (3) 1.9 0.0019 E14.5 retina CTAAAAGGAG 16.4 0.0164 E14.5 retina GCGTACCGCG 1.8 0.0018 E14.5 retina GTGGAAGTCA (3) 1.8 0.0018 E16.5 retina CTAAAAGGAG 30.8 0.0308 E16.5 retina GCGTACCGCG 3.6 0.0036 E16.5 retina GTAGAAGGAG (12) 1.8 0.0018 E16.5 retina TACTCATCAA 1.8 0.0018 E18.5 retina CTAAAAGGAG 10.9 0.0109 E18.5 retina TACTCATCAA 1.8 0.0018 P0.5 retina CTAAAAGGAG 13.7 0.0137 P0.5 retina GTCATAGCTG (590) 3.9 0.0039 P0.5 retina TACTCATCAA 2 0.002 P2.5 retina CTAAAAGGAG 21.1 0.0211 P2.5 retina GTAGAAGGAG (12) 3.5 0.0035 P2.5 retina GTCATAGCTG (590) 1.8 0.0018 P2.5 retina GTGGAAGTCA (3) 1.8 0.0018 P4.5 retina CTAAAAGGAG 7.9 0.0079 P4.5 retina TACTCATCAA 4 0.004 P4.5 retina GTCATAGCTG (590) 2 0.002 P4.5 retina GTGGAAGTCA (3) 2 0.002 P6.5 retina CTAAAAGGAG 13.3 0.0133 P6.5 retina GTCATAGCTG (590) 3.3 0.0033 P10.5 crx- retina CTAAAAGGAG 9.3 0.0093 P10.5 crx+ retina CTAAAAGGAG 7.7 0.0077 Adult retinal CTAAAAGGAG 3.7 0.0037 Adult retinal GTCATAGCTG (590) 1.9 0.0019 ONL GTCATAGCTG (590) 5.7 0.0057 ONL GTGGAAGTCA (3) 1.9 0.0019