| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | AATGCACAAA (2) AATGCACACA (5)
| 3.2 | 0.0032 |
| Cb medulloblastoma | AATGCAAAAA (2)
| 4.6 | 0.0046 |
| P8 GC+1d culture | AATGCAAAAA (2) AATGCACAAA (2) AATGCACACA (5) GAAATTTATG (3)
| 7.9 | 0.0079 |
| P8 GC+SHH+1d culture | AATGCAAAAA (2) AATGCACACA (5)
| 3.5 | 0.0035 |
| Hypothalamus | GCAGCCCTTG (3)
| 1.8 | 0.0018 |
| E14.5 retina | AATGCAAAAA (2) AATGCACAAA (2) GCAGCCCTTG (3)
| 10.9 | 0.0109 |
| E16.5 retina | AATGCAAAAA (2) AATGCACAAA (2) GAAATTTATG (3) GCAGCCCTTG (3)
| 9 | 0.009 |
| E18.5 retina | AATGCAAAAA (2) AATGCACAAA (2) AATGCACACA (5) GCAGCCCTTG (3)
| 12.7 | 0.0127 |
| P0.5 retina | AATGCACACA (5) GCAGCCCTTG (3)
| 4 | 0.004 |
| P2.5 retina | AATGCAAAAA (2) GAAATTTATG (3) GCAGCCCTTG (3)
| 5.4 | 0.0054 |
| P4.5 retina | AATGCAAAAA (2) AATGCACAAA (2)
| 6 | 0.006 |
| P6.5 retina | AATGCACACA (5)
| 1.7 | 0.0017 |
| P10.5 crx+ retina | AATGCACAAA (2) AATGCACACA (5)
| 5.7 | 0.0057 |
| ONL | AATGCAAAAA (2) AATGCACACA (5)
| 13.4 | 0.0134 |