Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.249827	Lsm11	U7 snRNP-specific Sm-like protein LSM11	11		72290
Gene Ontology	nucleus | pre-mRNA splicing factor activity | ribonucleoprotein complex | small nucleolar ribonucleoprotein complex | viral nucleocapsid
Human Homolog	LSM11[LSM11, U7 small nuclear RNA associated]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 46 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC CCTTTAATCC (355) 52.2 0.0522 P8 Cb GC CAGCAAAAAA (5) 1.6 0.0016 Cb medulloblastoma CCTTTAATCC (355) 41.6 0.0416 Cb medulloblastoma CAGCAAAAAA (5) 2.3 0.0023 Cb medulloblastoma GATGGATGAA (3) 2.3 0.0023 P8 GC+1d culture CCTTTAATCC (355) 32 0.032 P8 GC+1d culture GATGGATGAA (3) 1.1 0.0011 P8 GC+1d culture GCTGAAGCTG (2) 1.1 0.0011 P8 GC+SHH+1d culture CCTTTAATCC (355) 25.8 0.0258 P8 GC+SHH+1d culture CAGCAAAAAA (5) 1.2 0.0012 P8 GC+SHH+1d culture GCTGAAGCTG (2) 1.2 0.0012 3T3 fibroblasts CCTTTAATCC (355) 70.1 0.0701 E15 cortex CCTTTAATCC (355) 54.4 0.0544 E15 cortex GCTGAAGCTG (2) 4.9 0.0049 P1 cortex CCTTTAATCC (355) 154.5 0.1545 Hypothalamus CCTTTAATCC (355) 19.9 0.0199 Hypothalamus AACTGTTCTC 1.8 0.0018 Hypothalamus CAGCAAAAAA (5) 1.8 0.0018 E12.5 retina CCTTTAATCC (355) 75.1 0.0751 E12.5 retina CAGCAAAAAA (5) 3.8 0.0038 E12.5 retina GATGGATGAA (3) 1.9 0.0019 E14.5 retina CCTTTAATCC (355) 120.3 0.1203 E14.5 retina CAGCAAAAAA (5) 1.8 0.0018 E14.5 retina GCTGAAGCTG (2) 1.8 0.0018 E16.5 retina CCTTTAATCC (355) 68.8 0.0688 E18.5 retina CCTTTAATCC (355) 23.6 0.0236 E18.5 retina CAGCAAAAAA (5) 7.3 0.0073 P0.5 retina CCTTTAATCC (355) 72.6 0.0726 P0.5 retina GCTGAAGCTG (2) 5.9 0.0059 P2.5 retina CCTTTAATCC (355) 70.4 0.0704 P2.5 retina AACTGTTCTC 3.5 0.0035 P2.5 retina CAGCAAAAAA (5) 3.5 0.0035 P4.5 retina CCTTTAATCC (355) 43.6 0.0436 P4.5 retina CCCTAAAACA (2) 2 0.002 P4.5 retina GCTGAAGCTG (2) 2 0.002 P6.5 retina CCTTTAATCC (355) 70 0.07 P6.5 retina CCCTAAAACA (2) 3.3 0.0033 P6.5 retina CAGCAAAAAA (5) 1.7 0.0017 P10.5 crx- retina CCTTTAATCC (355) 63.2 0.0632 P10.5 crx- retina CAGCAAAAAA (5) 1.9 0.0019 P10.5 crx- retina GCTGAAGCTG (2) 1.9 0.0019 P10.5 crx+ retina CCTTTAATCC (355) 38.4 0.0384 P10.5 crx+ retina CAGCAAAAAA (5) 1.9 0.0019 Adult retinal CCTTTAATCC (355) 129.6 0.1296 ONL CCTTTAATCC (355) 84.3 0.0843 ONL GCTGAAGCTG (2) 3.8 0.0038