Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250030	Rnu65	RNA, U65 small nucleolar			104367
Mm.250030	Rpl12	ribosomal protein L12	2		269261
Gene Ontology	cytoplasm | cytosolic ribosome (sensu Eukarya) | intracellular | nucleolus | nucleus | protein binding | protein biosynthesis | ribonucleoprotein complex | ribosome | ribosome biogenesis | RNA binding | structural constituent of ribosome
Human Homolog	RPL12[ribosomal protein L12]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 58 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ACATCATAGA (2) 70.1 0.0701 P8 Cb GC AGGGTGGCGG (2) 6.5 0.0065 P8 Cb GC ACATCATCGA (2) 4.9 0.0049 P8 Cb GC CCGCCCAAGT (2) 1.6 0.0016 Cb medulloblastoma ACATCATAGA (2) 20.8 0.0208 Cb medulloblastoma AGGGTGGCGG (2) 4.6 0.0046 P8 GC+1d culture ACATCATAGA (2) 41.1 0.0411 P8 GC+1d culture ACATCATCGA (2) 2.3 0.0023 P8 GC+1d culture AGGGTGGCGG (2) 1.1 0.0011 P8 GC+SHH+1d culture ACATCATAGA (2) 52.7 0.0527 P8 GC+SHH+1d culture AGGGTGGCGG (2) 1.2 0.0012 P8 GC+SHH+1d culture CCGCCCAAGT (2) 1.2 0.0012 P8 GC+SHH+1d culture CCTTATTGCG (2) 1.2 0.0012 3T3 fibroblasts ACATCATAGA (2) 14 0.014 3T3 fibroblasts AGGGTGGCGG (2) 14 0.014 3T3 fibroblasts CCGCCCAAGT (2) 7 0.007 E15 cortex ACATCATAGA (2) 14.8 0.0148 E15 cortex CCGCCCAAGT (2) 9.9 0.0099 P1 cortex ACATCATAGA (2) 59.1 0.0591 P1 cortex CCGCCCAAGT (2) 9.1 0.0091 Hypothalamus ACATCATAGA (2) 52.5 0.0525 Hypothalamus ACTTCATAGA (2) 1.8 0.0018 Hypothalamus AGGGTGGCGG (2) 1.8 0.0018 E12.5 retina ACATCATAGA (2) 178.3 0.1783 E12.5 retina ACGTCATAGA (2) 1.9 0.0019 E12.5 retina GGAGTGCCCA (2) 1.9 0.0019 E14.5 retina ACATCATAGA (2) 109.3 0.1093 E14.5 retina AGGGTGGCGG (2) 18.2 0.0182 E14.5 retina ACTTCATAGA (2) 1.8 0.0018 E16.5 retina ACATCATAGA (2) 103.2 0.1032 E16.5 retina AGGGTGGCGG (2) 9.1 0.0091 E16.5 retina GGAGTGCCCA (2) 1.8 0.0018 E18.5 retina ACATCATAGA (2) 72.8 0.0728 E18.5 retina AGGGTGGCGG (2) 9.1 0.0091 E18.5 retina ACGTCATAGA (2) 3.6 0.0036 E18.5 retina ACTTCATAGA (2) 1.8 0.0018 P0.5 retina ACATCATAGA (2) 55 0.055 P0.5 retina AGGGTGGCGG (2) 2 0.002 P0.5 retina CCGCCCAAGT (2) 2 0.002 P0.5 retina CCTTATTGCG (2) 2 0.002 P0.5 retina GGAGTGCCCA (2) 2 0.002 P2.5 retina ACATCATAGA (2) 44 0.044 P2.5 retina AGGGTGGCGG (2) 1.8 0.0018 P2.5 retina CCGCCCAAGT (2) 1.8 0.0018 P4.5 retina ACATCATAGA (2) 59.4 0.0594 P4.5 retina ACTTCATAGA (2) 5.9 0.0059 P4.5 retina AGGGTGGCGG (2) 2 0.002 P4.5 retina GGAGTGCCCA (2) 2 0.002 P6.5 retina ACATCATAGA (2) 31.7 0.0317 P6.5 retina CCTTATTGCG (2) 1.7 0.0017 P10.5 crx- retina ACATCATAGA (2) 72.5 0.0725 P10.5 crx- retina AGGGTGGCGG (2) 3.7 0.0037 P10.5 crx+ retina ACATCATAGA (2) 42.3 0.0423 P10.5 crx+ retina AGGGTGGCGG (2) 3.8 0.0038 P10.5 crx+ retina ACTTCATAGA (2) 1.9 0.0019 Adult retinal ACATCATAGA (2) 9.3 0.0093 ONL ACATCATAGA (2) 15.3 0.0153 ONL ACTTCATAGA (2) 1.9 0.0019