Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250265	Arnt	aryl hydrocarbon receptor nuclear translocator	3	3 47.9 cM	11863
Gene Ontology	cytoplasm | DNA binding | nucleus | protein binding | receptor activity | regulation of transcription | regulation of transcription, DNA-dependent | response to toxin | signal transducer activity | signal transduction | transcription factor activity | transcription factor complex | transcriptional activator activity
Human Homolog	ARNT[aryl hydrocarbon receptor nuclear translocator]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 49 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TAGCAAAGAT 6.5 0.0065 P8 Cb GC CCTTTGATCC (22) 3.3 0.0033 P8 Cb GC TGGGTTCTGA (4) 1.6 0.0016 Cb medulloblastoma CCTTTGATCC (22) 2.3 0.0023 P8 GC+1d culture TAGCAAAGAT 5.7 0.0057 P8 GC+1d culture TAGTGCCCTG 3.4 0.0034 P8 GC+1d culture CCTTTGATCC (22) 1.1 0.0011 P8 GC+1d culture GAAACTCAAC (2) 1.1 0.0011 P8 GC+1d culture TGGGTTCTGA (4) 1.1 0.0011 P8 GC+SHH+1d culture TAGCAAAGAT 3.5 0.0035 P8 GC+SHH+1d culture CCTTTGATCC (22) 1.2 0.0012 P8 GC+SHH+1d culture TAGTGCCCTG 1.2 0.0012 3T3 fibroblasts TGGGTTCTGA (4) 31.5 0.0315 3T3 fibroblasts TAGTGCCCTG 10.5 0.0105 P1 cortex CCTTTGATCC (22) 13.6 0.0136 Hypothalamus TGGGTTCTGA (4) 10.9 0.0109 Hypothalamus TAGCAAAGAT 3.6 0.0036 E12.5 retina TAGCAAAGAT 9.4 0.0094 E12.5 retina CCTTTGATCC (22) 5.6 0.0056 E12.5 retina TGGGTTCTGA (4) 1.9 0.0019 E14.5 retina CCTTTGATCC (22) 1.8 0.0018 E14.5 retina GAAACTCAAC (2) 1.8 0.0018 E14.5 retina TAGCAAAGAT 1.8 0.0018 E14.5 retina TGGGTTCTGA (4) 1.8 0.0018 E16.5 retina TAGCAAAGAT 9.1 0.0091 E16.5 retina CCTTTGATCC (22) 3.6 0.0036 E16.5 retina TGGGTTCTGA (4) 1.8 0.0018 E18.5 retina TAGCAAAGAT 5.5 0.0055 E18.5 retina CCTTTGATCC (22) 1.8 0.0018 P0.5 retina TAGCAAAGAT 9.8 0.0098 P0.5 retina TGGGTTCTGA (4) 3.9 0.0039 P0.5 retina CCTTTGATCC (22) 2 0.002 P0.5 retina TAGTGCCCTG 2 0.002 P2.5 retina CCTTTGATCC (22) 7 0.007 P2.5 retina TAGCAAAGAT 1.8 0.0018 P2.5 retina TGGGTTCTGA (4) 1.8 0.0018 P4.5 retina TAGCAAAGAT 13.9 0.0139 P4.5 retina CCTTTGATCC (22) 5.9 0.0059 P6.5 retina TAGCAAAGAT 10 0.01 P6.5 retina CCTTTGATCC (22) 3.3 0.0033 P6.5 retina TGGGTTCTGA (4) 1.7 0.0017 P10.5 crx- retina TAGCAAAGAT 1.9 0.0019 P10.5 crx+ retina TAGCAAAGAT 9.6 0.0096 P10.5 crx+ retina CCTTTGATCC (22) 5.8 0.0058 P10.5 crx+ retina TGGGTTCTGA (4) 5.8 0.0058 Adult retinal TAGCAAAGAT 1.9 0.0019 ONL CCTTTGATCC (22) 5.7 0.0057 ONL TAGCAAAGAT 5.7 0.0057 ONL GAAACTCAAC (2) 3.8 0.0038