Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.250425
1700001O11Rik
RIKEN cDNA 1700001O11 gene
8
78318
Mm.250425
2310065K24Rik
RIKEN cDNA 2310065K24 gene
8
102122
Gene Ontology
nucleus
Human Homolog
NIP30[NEFA-interacting nuclear protein NIP30]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 30 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
ACCATCCTCT
(
2
)
3.3
0.0033
Cb medulloblastoma
TGACATTTTA
(
3
)
4.6
0.0046
Cb medulloblastoma
ACCATCCTCT
(
2
)
2.3
0.0023
P8 GC+1d culture
ACCATCCTCT
(
2
)
6.8
0.0068
P8 GC+1d culture
TCACCAGCTG
(
2
)
1.1
0.0011
P8 GC+SHH+1d culture
ACCATCCTCT
(
2
)
8.2
0.0082
P8 GC+SHH+1d culture
TCCTCCCCTC
(
3
)
1.2
0.0012
P1 cortex
ACCATCCTCT
(
2
)
4.5
0.0045
Hypothalamus
ACCATCCTCT
(
2
)
5.4
0.0054
E12.5 retina
ACCATCCTCT
(
2
)
7.5
0.0075
E12.5 retina
TCCTCCCCTC
(
3
)
1.9
0.0019
E14.5 retina
ACCATCCTCT
(
2
)
10.9
0.0109
E14.5 retina
TCCTCCCCTC
(
3
)
1.8
0.0018
E16.5 retina
ACCATCCTCT
(
2
)
5.4
0.0054
E16.5 retina
TCACCAGCTG
(
2
)
1.8
0.0018
E18.5 retina
ACCATCCTCT
(
2
)
1.8
0.0018
E18.5 retina
TCACCAGCTG
(
2
)
1.8
0.0018
P0.5 retina
ACCATCCTCT
(
2
)
9.8
0.0098
P0.5 retina
TCCTCCCCTC
(
3
)
2
0.002
P2.5 retina
ACCATCCTCT
(
2
)
10.6
0.0106
P4.5 retina
ACCATCCTCT
(
2
)
7.9
0.0079
P4.5 retina
TCACCAGCTG
(
2
)
2
0.002
P4.5 retina
TGACATTTTA
(
3
)
2
0.002
P6.5 retina
ACCATCCTCT
(
2
)
8.3
0.0083
P10.5 crx- retina
ACCATCCTCT
(
2
)
5.6
0.0056
P10.5 crx- retina
TCCTCCCCTC
(
3
)
1.9
0.0019
P10.5 crx+ retina
ACCATCCTCT
(
2
)
15.4
0.0154
P10.5 crx+ retina
TGACATTTTA
(
3
)
1.9
0.0019
Adult retinal
ACCATCCTCT
(
2
)
1.9
0.0019
ONL
ACCATCCTCT
(
2
)
3.8
0.0038
