Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.250786	Aqp4	aquaporin 4	18	18 6.0 cM	11829
Gene Ontology	integral to membrane | integral to plasma membrane | membrane | transport | transporter activity | water channel activity | water transport
Human Homolog	AQP4[aquaporin 4]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 60 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC ATGTTAAAAA (6) 11.4 0.0114 P8 Cb GC GAGGTGGGAG (7) 3.3 0.0033 P8 Cb GC GGCTCCTGGT (7) 1.6 0.0016 P8 Cb GC TGTATTTATA (9) 1.6 0.0016 Cb medulloblastoma ATGTTAAAAA (6) 25.4 0.0254 Cb medulloblastoma GGAAACTGGG (8) 2.3 0.0023 P8 GC+1d culture ATGTTAAAAA (6) 14.8 0.0148 P8 GC+1d culture TGTATTTATA (9) 8 0.008 P8 GC+1d culture GGCTCCTGGG (10) 2.3 0.0023 P8 GC+SHH+1d culture ATGTTAAAAA (6) 31.6 0.0316 P8 GC+SHH+1d culture GAGGTGGGAG (7) 2.3 0.0023 P8 GC+SHH+1d culture TGTATTTATA (9) 1.2 0.0012 3T3 fibroblasts GAGGTGGGAG (7) 7 0.007 P1 cortex ATGTTAAAAA (6) 4.5 0.0045 P1 cortex GAGGTGGGAG (7) 4.5 0.0045 P1 cortex GGCTCCTGGT (7) 4.5 0.0045 P1 cortex GGGGGGGGAA (12) 4.5 0.0045 P1 cortex TGTATTTATA (9) 4.5 0.0045 Hypothalamus ATGTTAAAAA (6) 3.6 0.0036 Hypothalamus TGTATTTATA (9) 3.6 0.0036 Hypothalamus GAGGTGGGAG (7) 1.8 0.0018 Hypothalamus GGAAACTGGG (8) 1.8 0.0018 E12.5 retina ATGTTAAAAA (6) 13.1 0.0131 E12.5 retina TGTATTTATA (9) 13.1 0.0131 E12.5 retina GTGGCTTTCA (8) 1.9 0.0019 E14.5 retina TGTATTTATA (9) 9.1 0.0091 E14.5 retina ATGTTAAAAA (6) 5.5 0.0055 E14.5 retina GAGGTGGGAG (7) 1.8 0.0018 E16.5 retina TGTATTTATA (9) 16.3 0.0163 E16.5 retina ATGTTAAAAA (6) 10.9 0.0109 E18.5 retina ATGTTAAAAA (6) 60 0.06 E18.5 retina TGTATTTATA (9) 16.4 0.0164 E18.5 retina GGCTCCTGGT (7) 1.8 0.0018 P0.5 retina ATGTTAAAAA (6) 15.7 0.0157 P0.5 retina GTGGCTTTCA (8) 3.9 0.0039 P0.5 retina GGGGGGGGAA (12) 2 0.002 P0.5 retina TGTATTTATA (9) 2 0.002 P2.5 retina ATGTTAAAAA (6) 21.1 0.0211 P2.5 retina TGTATTTATA (9) 15.8 0.0158 P2.5 retina GGCTCCTGGT (7) 1.8 0.0018 P2.5 retina GGGGGGGGAA (12) 1.8 0.0018 P4.5 retina ATGTTAAAAA (6) 13.9 0.0139 P4.5 retina TGTATTTATA (9) 9.9 0.0099 P4.5 retina GGCTCCTGGT (7) 2 0.002 P6.5 retina ATGTTAAAAA (6) 13.3 0.0133 P6.5 retina TGTATTTATA (9) 3.3 0.0033 P6.5 retina GGAAACTGGG (8) 1.7 0.0017 P6.5 retina GGCTCCTGGT (7) 1.7 0.0017 P10.5 crx- retina TGTATTTATA (9) 5.6 0.0056 P10.5 crx- retina GGAAACTGGG (8) 1.9 0.0019 P10.5 crx+ retina ATGTTAAAAA (6) 11.5 0.0115 P10.5 crx+ retina TGTATTTATA (9) 3.8 0.0038 P10.5 crx+ retina GGAAACTGGG (8) 1.9 0.0019 Adult retinal GGAAACTGGG (8) 5.6 0.0056 Adult retinal GGGGGGGGAA (12) 3.7 0.0037 Adult retinal ATGTTAAAAA (6) 1.9 0.0019 ONL TGTATTTATA (9) 9.6 0.0096 ONL ATGTTAAAAA (6) 5.7 0.0057 ONL GAGGTGGGAG (7) 1.9 0.0019 ONL GTGGCTTTCA (8) 1.9 0.0019