Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.251013	Kpnb1	karyopherin (importin) beta 1	11	11 D	16211
Gene Ontology	cytoplasm | nuclear pore | nucleus | protein binding | protein transport | protein transporter activity | protein-nucleus import, docking | ribosomal protein-nucleus import | transport
Human Homolog	KPNB1[karyopherin (importin) beta 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 11 In Situ Hybridization Images

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SAGE Tags

Total 80 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AGCTAAGTAA CAAGTGGTCT CCAGTCTGTG (3) CCAGTTTGTG (3) TCCTTCCCTT (3) 14.7 0.0147 Cb medulloblastoma CCAATCTGTG (2) CCAGTCTGTG (3) TCCTTCCCTT (3) 9.2 0.0092 P8 GC+1d culture AGCTAAGTAA CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) TCCTTCCCTT (3) 7.8 0.0078 P8 GC+SHH+1d culture AGCTAAGTAA CAAGTGGTCT CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) GGTCCTGCCC 22.3 0.0223 3T3 fibroblasts AGCTAAGTAA CCAAGGGCAT CCAAGTCTGT (2) CCAATCTGTG (2) CCAGTCTGTG (3) CCAGTTTGTG (3) 38.5 0.0385 E15 cortex AGCTAAGTAA CCAAGTCTGT (2) CCAATCTGTG (2) 19.7 0.0197 P1 cortex AGCTAAGTAA CCAATCTGTG (2) CCAGTCTGTG (3) 13.5 0.0135 Hypothalamus CCAATCTGTG (2) TCCTTCCCTT (3) 5.4 0.0054 E12.5 retina AGCTAAGTAA CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) 24.4 0.0244 E14.5 retina CCAAGTCTGT (2) CCAATCTGTG (2) CCAGTCTGTG (3) GGTCCTGCCC TCCTTCCCTT (3) 18.2 0.0182 E16.5 retina CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) TCCTTCCCTT (3) 21.7 0.0217 E18.5 retina AGCTAAGTAA CCAATCTGTG (2) CCAGTCTGTG (3) TCCTTCCCTT (3) 18.1 0.0181 P0.5 retina CCAATCTGTG (2) CCAGTCTGTG (3) 17.7 0.0177 P2.5 retina CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) TCCTTCCCTT (3) 14.2 0.0142 P4.5 retina AGCTAAGTAA CAAGTGGTCT CCAATCTGTG (2) CCAGTCTGTG (3) GGTCCTGCCC 25.9 0.0259 P6.5 retina AGCTAAGTAA CAAGTGGTCT CCAAGGGCAT CCAAGTCTGT (2) CCAATCTGTG (2) CCAGTCTGTG (3) CCAGTTTGTG (3) 25.2 0.0252 P10.5 crx- retina CCAATCTGTG (2) CCAGTCTGTG (3) 3.8 0.0038 P10.5 crx+ retina CCAAGGGCAT CCAAGTCTGT (2) CCAATCTGTG (2) CCAGTCTGTG (3) 21.1 0.0211 Adult retinal CAAGTGGTCT CCAAGGGCAT CCAATCTGTG (2) CCAGTCTGTG (3) 18.6 0.0186 ONL CCAATCTGTG (2) CCAGTCTGTG (3) 3.8 0.0038