Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25148	Atp6ap2	ATPase, H+ transporting, lysosomal accessory protein 2	X	X A1.1	70495
Gene Ontology	hydrogen ion transporter activity | hydrolase activity | integral to membrane | proton transport
Human Homolog	ATP6AP2[ATPase, H+ transporting, lysosomal accessory protein 2]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

Total 8 In Situ Hybridization Images

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SAGE Tags

Total 84 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TACCATCTTC (2) 14.7 0.0147 P8 Cb GC TGCAAATGGA (2) 4.9 0.0049 P8 Cb GC TTTGGGGCTG (6) 4.9 0.0049 P8 Cb GC GCTGTGCTGG (3) 1.6 0.0016 P8 Cb GC GGCTTCTCTG (7) 1.6 0.0016 P8 Cb GC GGTTTTCCCC (4) 1.6 0.0016 Cb medulloblastoma TGCAAATGGA (2) 55.5 0.0555 Cb medulloblastoma TTTGGGGCTG (6) 18.5 0.0185 Cb medulloblastoma TGTTTGTGTG (10) 2.3 0.0023 P8 GC+1d culture TGCAAATGGA (2) 18.3 0.0183 P8 GC+1d culture TTTGGGGCTG (6) 17.1 0.0171 P8 GC+1d culture TACCATCTTC (2) 10.3 0.0103 P8 GC+1d culture CTTCAAGATA 2.3 0.0023 P8 GC+1d culture GAGGCAGGGG (2) 1.1 0.0011 P8 GC+SHH+1d culture TACCATCTTC (2) 21.1 0.0211 P8 GC+SHH+1d culture TGCAAATGGA (2) 18.7 0.0187 P8 GC+SHH+1d culture TTTGGGGCTG (6) 8.2 0.0082 3T3 fibroblasts TTTGGGGCTG (6) 14 0.014 3T3 fibroblasts TGCAAATGGA (2) 7 0.007 E15 cortex TGCAAATGGA (2) 14.8 0.0148 E15 cortex TTTGGGGCTG (6) 9.9 0.0099 P1 cortex TGCAAATGGA (2) 18.2 0.0182 P1 cortex TTTGGGGCTG (6) 13.6 0.0136 P1 cortex TGCAAATGGG 4.5 0.0045 Hypothalamus TGCAAATGGA (2) 58 0.058 Hypothalamus TTTGGGGCTG (6) 14.5 0.0145 Hypothalamus GAGGCAGGGG (2) 3.6 0.0036 Hypothalamus GTTCACTGGA (2) 3.6 0.0036 Hypothalamus CTTCAAGATA 1.8 0.0018 Hypothalamus CTTGGAGGAA (4) 1.8 0.0018 Hypothalamus GCTGTGCTGG (3) 1.8 0.0018 Hypothalamus TGCAAATGGG 1.8 0.0018 Hypothalamus TGTTTGTGTG (10) 1.8 0.0018 Hypothalamus TTACTCGCGC 1.8 0.0018 E12.5 retina TGCAAATGGA (2) 9.4 0.0094 E12.5 retina TTTGGGGCTG (6) 3.8 0.0038 E12.5 retina CTTGGAGGAA (4) 1.9 0.0019 E12.5 retina TACCATCTTC (2) 1.9 0.0019 E14.5 retina TGCAAATGGA (2) 14.6 0.0146 E14.5 retina TTTGGGGCTG (6) 3.6 0.0036 E14.5 retina GGTTTTCCCC (4) 1.8 0.0018 E14.5 retina GTTCACTGGA (2) 1.8 0.0018 E14.5 retina TGTTTGTGTG (10) 1.8 0.0018 E16.5 retina TGCAAATGGA (2) 9.1 0.0091 E16.5 retina ATATTCCAGT (2) 1.8 0.0018 E16.5 retina GGTTTTCCCC (4) 1.8 0.0018 E16.5 retina TGCAAATGGG 1.8 0.0018 E16.5 retina TTTGGGGCTG (6) 1.8 0.0018 E18.5 retina TGCAAATGGA (2) 32.7 0.0327 E18.5 retina GAGGCAGGGG (2) 3.6 0.0036 E18.5 retina TTTGGGGCTG (6) 3.6 0.0036 E18.5 retina GGCTTCTCTG (7) 1.8 0.0018 P0.5 retina TTTGGGGCTG (6) 17.7 0.0177 P0.5 retina TGCAAATGGA (2) 11.8 0.0118 P2.5 retina TGCAAATGGA (2) 10.6 0.0106 P2.5 retina GCTGTGCTGG (3) 3.5 0.0035 P2.5 retina TTTGGGGCTG (6) 3.5 0.0035 P2.5 retina CTTGGAGGAA (4) 1.8 0.0018 P2.5 retina TGTTTGTGTG (10) 1.8 0.0018 P4.5 retina TGCAAATGGA (2) 25.8 0.0258 P4.5 retina TTTGGGGCTG (6) 7.9 0.0079 P4.5 retina TGTTTGTGTG (10) 2 0.002 P4.5 retina TTACTCGCGC 2 0.002 P6.5 retina TGCAAATGGA (2) 35 0.035 P6.5 retina TTTGGGGCTG (6) 11.7 0.0117 P6.5 retina CTTCAAGATA 1.7 0.0017 P6.5 retina CTTGGAGGAA (4) 1.7 0.0017 P6.5 retina TGTTTGTGTG (10) 1.7 0.0017 P10.5 crx- retina TTTGGGGCTG (6) 63.2 0.0632 P10.5 crx- retina TACCATCTTC (2) 16.7 0.0167 P10.5 crx- retina TGCAAATGGA (2) 5.6 0.0056 P10.5 crx- retina TTACTCGCGC 1.9 0.0019 P10.5 crx+ retina TGCAAATGGA (2) 36.5 0.0365 P10.5 crx+ retina TACCATCTTC (2) 21.1 0.0211 P10.5 crx+ retina TTTGGGGCTG (6) 15.4 0.0154 Adult retinal TGCAAATGGA (2) 31.5 0.0315 Adult retinal TTTGGGGCTG (6) 31.5 0.0315 Adult retinal ATATTCCAGT (2) 5.6 0.0056 Adult retinal GGTTTTCCCC (4) 1.9 0.0019 ONL TGCAAATGGA (2) 19.2 0.0192 ONL TTTGGGGCTG (6) 19.2 0.0192 ONL GAGGCAGGGG (2) 5.7 0.0057 ONL CTTGGAGGAA (4) 1.9 0.0019 ONL TACCATCTTC (2) 1.9 0.0019