Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.252406
4930430E16Rik
RIKEN cDNA 4930430E16 gene
11
73873
Human Homolog
FLJ13305[hypothetical protein FLJ13305]
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
Total 8 In Situ Hybridization Images
Images -- Click to Enlarge
SAGE Tags
Total 57 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAGAAACCAG (
7
)
57.1
0.0571
P8 Cb GC
TCACTAAAAA
(
3
)
3.3
0.0033
P8 Cb GC
GAGGAGGAGG (
35
)
1.6
0.0016
Cb medulloblastoma
AAGAAACCAG (
7
)
30.1
0.0301
Cb medulloblastoma
TCACTAAAAA
(
3
)
6.9
0.0069
P8 GC+1d culture
AAGAAACCAG (
7
)
49.1
0.0491
P8 GC+1d culture
TCACTAAAAA
(
3
)
4.6
0.0046
P8 GC+SHH+1d culture
AAGAAACCAG (
7
)
51.5
0.0515
P8 GC+SHH+1d culture
ACTTTGTGTC
(
2
)
1.2
0.0012
P8 GC+SHH+1d culture
GAGGAGGAGG (
35
)
1.2
0.0012
P8 GC+SHH+1d culture
TCACTAAAAA
(
3
)
1.2
0.0012
3T3 fibroblasts
AAGAAACCAG (
7
)
7
0.007
3T3 fibroblasts
GAGGAGGAGG (
35
)
3.5
0.0035
E15 cortex
AAGAAACCAG (
7
)
9.9
0.0099
E15 cortex
GAGGAGGAGG (
35
)
4.9
0.0049
P1 cortex
AAGAAACCAG (
7
)
22.7
0.0227
P1 cortex
GAGGAGGAGG (
35
)
4.5
0.0045
Hypothalamus
AAGAAACCAG (
7
)
21.7
0.0217
Hypothalamus
GAGGAGGAGG (
35
)
7.2
0.0072
E12.5 retina
AAGAAACCAG (
7
)
54.4
0.0544
E12.5 retina
GAGGAGGAGG (
35
)
1.9
0.0019
E14.5 retina
AAGAAACCAG (
7
)
54.7
0.0547
E16.5 retina
AAGAAACCAG (
7
)
54.3
0.0543
E16.5 retina
ACTTTGTGTC
(
2
)
1.8
0.0018
E16.5 retina
TCACTAAAAA
(
3
)
1.8
0.0018
E18.5 retina
AAGAAACCAG (
7
)
14.6
0.0146
E18.5 retina
TCACTAAAAA
(
3
)
3.6
0.0036
E18.5 retina
TCACTAACCC
1.8
0.0018
P0.5 retina
AAGAAACCAG (
7
)
27.5
0.0275
P0.5 retina
TCACTAACCC
2
0.002
P2.5 retina
AAGAAACCAG (
7
)
17.6
0.0176
P2.5 retina
TCACTAACCC
3.5
0.0035
P2.5 retina
ACTTTGTGTC
(
2
)
1.8
0.0018
P2.5 retina
GAGGAGGAGG (
35
)
1.8
0.0018
P4.5 retina
AAGAAACCAG (
7
)
25.8
0.0258
P4.5 retina
TCACTAAAAA
(
3
)
4
0.004
P4.5 retina
GAGGAGGAGG (
35
)
2
0.002
P4.5 retina
TCACTAACCC
2
0.002
P6.5 retina
AAGAAACCAG (
7
)
8.3
0.0083
P6.5 retina
TCACTAAAAA
(
3
)
3.3
0.0033
P6.5 retina
TCACTAACCC
1.7
0.0017
P10.5 crx- retina
AAGAAACCAG (
7
)
16.7
0.0167
P10.5 crx- retina
TCACTAACCC
3.7
0.0037
P10.5 crx- retina
GAGGAGGAGG (
35
)
1.9
0.0019
P10.5 crx- retina
TCACTAAAAA
(
3
)
1.9
0.0019
P10.5 crx+ retina
AAGAAACCAG (
7
)
9.6
0.0096
P10.5 crx+ retina
ACTTTGTGTC
(
2
)
3.8
0.0038
P10.5 crx+ retina
TCACTAAAAA
(
3
)
3.8
0.0038
P10.5 crx+ retina
TCACTAACCC
1.9
0.0019
Adult retinal
TCACTAACCC
9.3
0.0093
Adult retinal
AAGAAACCAG (
7
)
3.7
0.0037
Adult retinal
ACTTTGTGTC
(
2
)
3.7
0.0037
Adult retinal
GAGGAGGAGG (
35
)
3.7
0.0037
ONL
TCACTAACCC
9.6
0.0096
ONL
ACTTTGTGTC
(
2
)
3.8
0.0038
ONL
GAGGAGGAGG (
35
)
1.9
0.0019
ONL
TCACTAAAAA
(
3
)
1.9
0.0019
