Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252497	6720462K09Rik	RIKEN cDNA 6720462K09 gene	4		399579
Mm.252497	Kif1b	kinesin family member 1B	4	4 70.9 cM	16561
Gene Ontology	ATP binding | kinesin complex | microtubule associated complex | microtubule motor activity | microtubule-based process | mitochondrion | motor activity
Human Homolog	KIF1B[kinesin family member 1B] | KIF1B[kinesin family member 1B]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 196 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC AAAAAATAAA (17) 11.4 0.0114 P8 Cb GC TTTTTTTTCC (11) 11.4 0.0114 P8 Cb GC TTTTATTTGT (7) 8.2 0.0082 P8 Cb GC AATGAGACAA (2) 3.3 0.0033 P8 Cb GC CTGTGCTTGC (5) 3.3 0.0033 P8 Cb GC CTTGAAGATT (2) 3.3 0.0033 P8 Cb GC GAGGACTTTG (9) 3.3 0.0033 P8 Cb GC TGGCCTAACA (3) 3.3 0.0033 P8 Cb GC TTTTAGACCC (2) 3.3 0.0033 P8 Cb GC TTTTATTTTG (8) 3.3 0.0033 P8 Cb GC ATTTTTCCTG (7) 1.6 0.0016 P8 Cb GC GCATTGTTTT (9) 1.6 0.0016 P8 Cb GC GTTTTAAAAA (22) 1.6 0.0016 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GAGAAAAGGA (9) 9.2 0.0092 Cb medulloblastoma AAAAAATAAA (17) 6.9 0.0069 Cb medulloblastoma GGGGGGGGGG (112) 6.9 0.0069 Cb medulloblastoma TTTTATTTTG (8) 6.9 0.0069 Cb medulloblastoma GTTTTAAAAA (22) 4.6 0.0046 Cb medulloblastoma TTTTTTTTCC (11) 4.6 0.0046 Cb medulloblastoma AGTTTAGTGT (2) 2.3 0.0023 Cb medulloblastoma CCCCCTTCCC (3) 2.3 0.0023 Cb medulloblastoma TAAATTAAAT (3) 2.3 0.0023 Cb medulloblastoma TGGCCTAACA (3) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture TTTTAGACCC (2) 10.3 0.0103 P8 GC+1d culture TTTTATTTTG (8) 9.1 0.0091 P8 GC+1d culture AAAAAATAAA (17) 8 0.008 P8 GC+1d culture TTTTATTTGT (7) 6.8 0.0068 P8 GC+1d culture ACAACATAGA (2) 3.4 0.0034 P8 GC+1d culture GGGGGGGGGG (112) 2.3 0.0023 P8 GC+1d culture TTTTTTTTCC (11) 2.3 0.0023 P8 GC+1d culture AATGAGACAA (2) 1.1 0.0011 P8 GC+1d culture ATTTTTCCTG (7) 1.1 0.0011 P8 GC+1d culture GAGAAAAGGA (9) 1.1 0.0011 P8 GC+1d culture GAGGACTTTG (9) 1.1 0.0011 P8 GC+1d culture GTTTTAAAAA (22) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GTTTTAAAAA (22) 8.2 0.0082 P8 GC+SHH+1d culture TTTTAGACCC (2) 8.2 0.0082 P8 GC+SHH+1d culture GGGGGGGGGG (112) 7 0.007 P8 GC+SHH+1d culture TTTTATTTGT (7) 7 0.007 P8 GC+SHH+1d culture TTTTATTTTG (8) 5.9 0.0059 P8 GC+SHH+1d culture TTTTTTTTCC (11) 5.9 0.0059 P8 GC+SHH+1d culture GAGAAAAGGA (9) 3.5 0.0035 P8 GC+SHH+1d culture GAGGACTTTG (9) 3.5 0.0035 P8 GC+SHH+1d culture AAAAAATAAA (17) 2.3 0.0023 P8 GC+SHH+1d culture GTTTTAAGAA (4) 2.3 0.0023 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GGGGGGGGGG (112) 3.5 0.0035 3T3 fibroblasts TTTTTTTTCC (11) 3.5 0.0035 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GAGAAAAGGA (9) 14.8 0.0148 E15 cortex AATGAGACAA (2) 4.9 0.0049 E15 cortex ATTTTTCCTG (7) 4.9 0.0049 E15 cortex GAGGACTTTG (9) 4.9 0.0049 E15 cortex GGGGGGGGGG (112) 4.9 0.0049 E15 cortex GTTTTAAAAA (22) 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex TTTTATTTTG (8) 31.8 0.0318 P1 cortex AATGAGACAA (2) 13.6 0.0136 P1 cortex ACAACATAGA (2) 4.5 0.0045 P1 cortex GAGGACTTTG (9) 4.5 0.0045 P1 cortex GCATTGTTTT (9) 4.5 0.0045 P1 cortex TTTTAGACCC (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus TTTTTTTTCC (11) 12.7 0.0127 Hypothalamus AAAAAATAAA (17) 9.1 0.0091 Hypothalamus TTTTATTTTG (8) 9.1 0.0091 Hypothalamus GAGAAAAGGA (9) 5.4 0.0054 Hypothalamus TTTTATTTGT (7) 5.4 0.0054 Hypothalamus ACAACATAGA (2) 1.8 0.0018 Hypothalamus GCAGCCCTTG (6) 1.8 0.0018 Hypothalamus GCATTGTTTT (9) 1.8 0.0018 Hypothalamus GGGGGGGGGG (112) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina AAAAAATAAA (17) 9.4 0.0094 E12.5 retina TTTTATTTGT (7) 9.4 0.0094 E12.5 retina GTTTTAAAAA (22) 3.8 0.0038 E12.5 retina TTTTAGACCC (2) 3.8 0.0038 E12.5 retina GAGAAAAGGA (9) 1.9 0.0019 E12.5 retina TTTTTTTTCC (11) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina TTTTATTTGT (7) 21.9 0.0219 E14.5 retina TTTTTTTTCC (11) 18.2 0.0182 E14.5 retina GAAAATGAAA (11) 10.9 0.0109 E14.5 retina GTTTTAAAAA (22) 9.1 0.0091 E14.5 retina AAAAAATAAA (17) 5.5 0.0055 E14.5 retina TAACAGCTGT (6) 3.6 0.0036 E14.5 retina ATTTTTCCTG (7) 1.8 0.0018 E14.5 retina CTTGAAGATT (2) 1.8 0.0018 E14.5 retina GAGGACTTTG (9) 1.8 0.0018 E14.5 retina GCAGCCCTTG (6) 1.8 0.0018 E14.5 retina GCATTGTTTT (9) 1.8 0.0018 E14.5 retina GTTTTAAGAA (4) 1.8 0.0018 E14.5 retina TTTTAGACCC (2) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina TTTTTTTTCC (11) 36.2 0.0362 E16.5 retina TTTTATTTGT (7) 14.5 0.0145 E16.5 retina AAAAAATAAA (17) 9.1 0.0091 E16.5 retina GTTTTAAAAA (22) 7.2 0.0072 E16.5 retina TTTTATTTTG (8) 5.4 0.0054 E16.5 retina GCAGCCCTTG (6) 1.8 0.0018 E16.5 retina GCATTGTTTT (9) 1.8 0.0018 E16.5 retina TAACAGCTGT (6) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GTTTTAAAAA (22) 25.5 0.0255 E18.5 retina TTTTTTTTCC (11) 21.8 0.0218 E18.5 retina AAAAAATAAA (17) 16.4 0.0164 E18.5 retina TTTTATTTGT (7) 12.7 0.0127 E18.5 retina TTTTATTTTG (8) 5.5 0.0055 E18.5 retina CTGTGCTTGC (5) 1.8 0.0018 E18.5 retina CTTGAAGATT (2) 1.8 0.0018 E18.5 retina GCAGCCCTTG (6) 1.8 0.0018 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina TTTTATTTGT (7) 9.8 0.0098 P0.5 retina TTTTTTTTCC (11) 3.9 0.0039 P0.5 retina AAAAAATAAA (17) 2 0.002 P0.5 retina GAGGACTTTG (9) 2 0.002 P0.5 retina GCAGCCCTTG (6) 2 0.002 P0.5 retina TTTTAGACCC (2) 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina AAAAAATAAA (17) 12.3 0.0123 P2.5 retina TTTTATTTGT (7) 12.3 0.0123 P2.5 retina GGGGGGGGGG (112) 7 0.007 P2.5 retina TTTTTTTTCC (11) 5.3 0.0053 P2.5 retina TTTTATTTTG (8) 3.5 0.0035 P2.5 retina AGATTTTTGT (3) 1.8 0.0018 P2.5 retina AGTTTAGTGT (2) 1.8 0.0018 P2.5 retina CTTGAAGATT (2) 1.8 0.0018 P2.5 retina GAGAAAAGGA (9) 1.8 0.0018 P2.5 retina GCAGCCCTTG (6) 1.8 0.0018 P2.5 retina GTTTTAAAAA (22) 1.8 0.0018 P2.5 retina TAAATTAAAT (3) 1.8 0.0018 P2.5 retina TTTTAGACCC (2) 1.8 0.0018 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina AAAAAATAAA (17) 11.9 0.0119 P4.5 retina GGGGGGGGGG (112) 9.9 0.0099 P4.5 retina TTTTTTTTCC (11) 9.9 0.0099 P4.5 retina GTTTTAAAAA (22) 5.9 0.0059 P4.5 retina CTTGAAGATT (2) 4 0.004 P4.5 retina TTTTATTTTG (8) 4 0.004 P4.5 retina GAAAATGAAA (11) 2 0.002 P4.5 retina GAGGACTTTG (9) 2 0.002 P4.5 retina GCATTGTTTT (9) 2 0.002 P4.5 retina TTTTATTTGT (7) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina AAAAAATAAA (17) 10 0.01 P6.5 retina TTTTATTTTG (8) 6.7 0.0067 P6.5 retina GGGGGGGGGG (112) 3.3 0.0033 P6.5 retina TAAATTAAAT (3) 3.3 0.0033 P6.5 retina TTTTTTTTCC (11) 3.3 0.0033 P6.5 retina AGTTTAGTGT (2) 1.7 0.0017 P6.5 retina CCCCCTTCCC (3) 1.7 0.0017 P6.5 retina GAAAATGAAA (11) 1.7 0.0017 P6.5 retina GTTTTAAAAA (22) 1.7 0.0017 P6.5 retina TTTTAGACCC (2) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina TTTTATTTGT (7) 9.3 0.0093 P10.5 crx- retina TTTTATTTTG (8) 7.4 0.0074 P10.5 crx- retina AAAAAATAAA (17) 5.6 0.0056 P10.5 crx- retina GAGGACTTTG (9) 3.7 0.0037 P10.5 crx- retina GAGAAAAGGA (9) 1.9 0.0019 P10.5 crx- retina TTTTAGACCC (2) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GGGGGGGGGG (112) 9.6 0.0096 P10.5 crx+ retina TTTTTTTTCC (11) 3.8 0.0038 P10.5 crx+ retina AAAAAATAAA (17) 1.9 0.0019 P10.5 crx+ retina AGATTTTTGT (3) 1.9 0.0019 P10.5 crx+ retina GAGGACTTTG (9) 1.9 0.0019 P10.5 crx+ retina TTTTAGACCC (2) 1.9 0.0019 P10.5 crx+ retina TTTTATTTTG (8) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal TTTTATTTTG (8) 9.3 0.0093 Adult retinal TTTTAGACCC (2) 5.6 0.0056 Adult retinal GAGGACTTTG (9) 3.7 0.0037 Adult retinal GGGGGGGGGG (112) 3.7 0.0037 Adult retinal AATGAGACAA (2) 1.9 0.0019 Adult retinal AGATTTTTGT (3) 1.9 0.0019 Adult retinal ATTTTTCCTG (7) 1.9 0.0019 Adult retinal GAGAAAAGGA (9) 1.9 0.0019 Adult retinal TTTTATTTGT (7) 1.9 0.0019 Adult retinal TTTTTTTTCC (11) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL AAAAAATAAA (17) 23 0.023 ONL TTTTAGACCC (2) 11.5 0.0115 ONL TTTTATTTTG (8) 7.7 0.0077 ONL GAGGACTTTG (9) 5.7 0.0057 ONL TAAATTAAAT (3) 5.7 0.0057 ONL CTTGAAGATT (2) 3.8 0.0038 ONL GTTTTAAAAA (22) 3.8 0.0038 ONL AGATTTTTGT (3) 1.9 0.0019 ONL CCCCCTTCCC (3) 1.9 0.0019 ONL GGGGGGGGGG (112) 1.9 0.0019 ONL TTTTTTTTCC (11) 1.9 0.0019