Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.25264	Ddx21	DEAD (Asp-Glu-Ala-Asp) box polypeptide 21	10	10 32.0 cM	56200
Gene Ontology	ATP binding | ATP dependent helicase activity | helicase activity | hydrolase activity | nucleic acid binding | nucleolus | nucleus | RNA binding | RNA helicase activity
Human Homolog	DDX21[DEAD (Asp-Glu-Ala-Asp) box polypeptide 21]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 54 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GGGTTCAGCT (2) 13.1 0.0131 P8 Cb GC ACTTTTCAAA (2) 1.6 0.0016 P8 Cb GC GATCTGCCTA 1.6 0.0016 Cb medulloblastoma GGGTTCAGCT (2) 6.9 0.0069 P8 GC+1d culture GGGTTCAGCT (2) 16 0.016 P8 GC+1d culture ACTTTTCAAA (2) 1.1 0.0011 P8 GC+SHH+1d culture GGGTTCAGCT (2) 12.9 0.0129 P8 GC+SHH+1d culture GGGTTCAGTT (3) 3.5 0.0035 P8 GC+SHH+1d culture GATCTGCCTA 1.2 0.0012 P8 GC+SHH+1d culture GTGCTTGTGG (6) 1.2 0.0012 3T3 fibroblasts GGGTTCAGCT (2) 3.5 0.0035 3T3 fibroblasts GGGTTCAGTT (3) 3.5 0.0035 E15 cortex GGGTTCAGCT (2) 19.8 0.0198 E15 cortex GATCTGCCTA 9.9 0.0099 E15 cortex ACTTTTCAAA (2) 4.9 0.0049 Hypothalamus GGGTTCAGCT (2) 5.4 0.0054 E12.5 retina GGGTTCAGCT (2) 9.4 0.0094 E12.5 retina GGGTTCAGTT (3) 5.6 0.0056 E12.5 retina ACTTTTCAAA (2) 3.8 0.0038 E12.5 retina GATCTGCCTA 1.9 0.0019 E14.5 retina GGGTTCAGCT (2) 10.9 0.0109 E14.5 retina GATCTGCCTA 1.8 0.0018 E14.5 retina GTGGCAGCAG (6) 1.8 0.0018 E16.5 retina GGGTTCAGCT (2) 10.9 0.0109 E16.5 retina ACTTTTCAAA (2) 1.8 0.0018 E16.5 retina GATCTGCCTA 1.8 0.0018 E16.5 retina TTTCATTTAA 1.8 0.0018 E18.5 retina GGGTTCAGCT (2) 14.6 0.0146 E18.5 retina GATCTGCCTA 1.8 0.0018 E18.5 retina TTTCATTTAA 1.8 0.0018 P0.5 retina GGGTTCAGCT (2) 3.9 0.0039 P0.5 retina GGGTTCAGTT (3) 2 0.002 P2.5 retina GGGTTCAGCT (2) 15.8 0.0158 P2.5 retina GATCTGCCTA 1.8 0.0018 P2.5 retina GGGTTCAGTT (3) 1.8 0.0018 P4.5 retina GGGTTCAGCT (2) 17.8 0.0178 P4.5 retina GATCTGCCTA 2 0.002 P4.5 retina GTGCTTGTGG (6) 2 0.002 P4.5 retina TTTCATTTAA 2 0.002 P6.5 retina GGGTTCAGCT (2) 11.7 0.0117 P6.5 retina GATCTGCCTA 3.3 0.0033 P6.5 retina GTGGCAGCAG (6) 1.7 0.0017 P10.5 crx- retina GGGTTCAGCT (2) 11.1 0.0111 P10.5 crx- retina GATCTGCCTA 1.9 0.0019 P10.5 crx- retina GGGTTCAGTT (3) 1.9 0.0019 P10.5 crx- retina GTGCTTGTGG (6) 1.9 0.0019 P10.5 crx- retina GTGGCAGCAG (6) 1.9 0.0019 P10.5 crx+ retina GGGTTCAGCT (2) 17.3 0.0173 P10.5 crx+ retina ACTTTTCAAA (2) 1.9 0.0019 P10.5 crx+ retina GATCTGCCTA 1.9 0.0019 P10.5 crx+ retina GGGTTCAGTT (3) 1.9 0.0019 Adult retinal GGGTTCAGCT (2) 13 0.013 ONL GGGTTCAGCT (2) 5.7 0.0057 ONL GGGTTCAGTT (3) 1.9 0.0019