Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.252918	1600012F09Rik	RIKEN cDNA 1600012F09 gene	13		67008
Human Homolog	C7orf36[chromosome 7 open reading frame 36]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 75 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAAA (658) 203.9 0.2039 P8 Cb GC TGTGTGTGTG (115) 27.7 0.0277 P8 Cb GC GTAATTGTTA (2) 4.9 0.0049 P8 Cb GC GCCCCTTTTG (5) 3.3 0.0033 P8 Cb GC ATGTCACAAA (7) 1.6 0.0016 P8 Cb GC CTTCAAGTAT (2) 1.6 0.0016 Cb medulloblastoma AAAAAAAAAA (658) 797.8 0.7978 Cb medulloblastoma TGTGTGTGTG (115) 30.1 0.0301 Cb medulloblastoma GCCCCTTTTG (5) 25.4 0.0254 Cb medulloblastoma GTAATTGTTA (2) 6.9 0.0069 P8 GC+1d culture AAAAAAAAAA (658) 204.3 0.2043 P8 GC+1d culture TGTGTGTGTG (115) 27.4 0.0274 P8 GC+1d culture GCCCCTTTTG (5) 12.6 0.0126 P8 GC+1d culture GTAATTGTTA (2) 5.7 0.0057 P8 GC+1d culture ATGTCACAAA (7) 1.1 0.0011 P8 GC+1d culture CTTCAAGTAT (2) 1.1 0.0011 P8 GC+SHH+1d culture AAAAAAAAAA (658) 278.7 0.2787 P8 GC+SHH+1d culture TGTGTGTGTG (115) 28.1 0.0281 P8 GC+SHH+1d culture GCCCCTTTTG (5) 14.1 0.0141 P8 GC+SHH+1d culture GTAATTGTTA (2) 3.5 0.0035 P8 GC+SHH+1d culture ATGTCACAAA (7) 1.2 0.0012 P8 GC+SHH+1d culture CACATTTGGA 1.2 0.0012 3T3 fibroblasts AAAAAAAAAA (658) 28 0.028 3T3 fibroblasts TGTGTGTGTG (115) 28 0.028 3T3 fibroblasts CACATTTGGA 3.5 0.0035 E15 cortex AAAAAAAAAA (658) 212.8 0.2128 E15 cortex GCCCCTTTTG (5) 4.9 0.0049 P1 cortex AAAAAAAAAA (658) 245.4 0.2454 P1 cortex TGTGTGTGTG (115) 18.2 0.0182 P1 cortex GTAATTGTTA (2) 4.5 0.0045 Hypothalamus AAAAAAAAAA (658) 123.2 0.1232 Hypothalamus TGTGTGTGTG (115) 25.4 0.0254 Hypothalamus CACATTTGGA 1.8 0.0018 E12.5 retina AAAAAAAAAA (658) 138.9 0.1389 E12.5 retina TGTGTGTGTG (115) 43.2 0.0432 E14.5 retina AAAAAAAAAA (658) 94.7 0.0947 E14.5 retina TGTGTGTGTG (115) 54.7 0.0547 E14.5 retina GCCCCTTTTG (5) 1.8 0.0018 E14.5 retina GTAATTGTTA (2) 1.8 0.0018 E16.5 retina AAAAAAAAAA (658) 43.5 0.0435 E16.5 retina TGTGTGTGTG (115) 39.8 0.0398 E16.5 retina GCCCCTTTTG (5) 7.2 0.0072 E16.5 retina CACATTTGGA 1.8 0.0018 E18.5 retina AAAAAAAAAA (658) 374.7 0.3747 E18.5 retina TGTGTGTGTG (115) 47.3 0.0473 E18.5 retina GTAATTGTTA (2) 1.8 0.0018 P0.5 retina AAAAAAAAAA (658) 117.8 0.1178 P0.5 retina TGTGTGTGTG (115) 21.6 0.0216 P0.5 retina GCCCCTTTTG (5) 2 0.002 P2.5 retina AAAAAAAAAA (658) 329.1 0.3291 P2.5 retina TGTGTGTGTG (115) 35.2 0.0352 P2.5 retina CACATTTGGA 3.5 0.0035 P2.5 retina CTTCAAGTAT (2) 3.5 0.0035 P2.5 retina GCCCCTTTTG (5) 1.8 0.0018 P2.5 retina GTAATTGTTA (2) 1.8 0.0018 P4.5 retina AAAAAAAAAA (658) 283.3 0.2833 P4.5 retina TGTGTGTGTG (115) 47.6 0.0476 P4.5 retina GCCCCTTTTG (5) 4 0.004 P4.5 retina GTAATTGTTA (2) 4 0.004 P6.5 retina AAAAAAAAAA (658) 266.8 0.2668 P6.5 retina TGTGTGTGTG (115) 41.7 0.0417 P6.5 retina GCCCCTTTTG (5) 1.7 0.0017 P10.5 crx- retina TGTGTGTGTG (115) 59.4 0.0594 P10.5 crx- retina AAAAAAAAAA (658) 44.6 0.0446 P10.5 crx- retina CACATTTGGA 3.7 0.0037 P10.5 crx- retina GCCCCTTTTG (5) 3.7 0.0037 P10.5 crx- retina GTAATTGTTA (2) 3.7 0.0037 P10.5 crx- retina CTTCAAGTAT (2) 1.9 0.0019 P10.5 crx+ retina AAAAAAAAAA (658) 96.1 0.0961 P10.5 crx+ retina TGTGTGTGTG (115) 44.2 0.0442 P10.5 crx+ retina GCCCCTTTTG (5) 1.9 0.0019 Adult retinal AAAAAAAAAA (658) 57.4 0.0574 Adult retinal TGTGTGTGTG (115) 53.7 0.0537 ONL AAAAAAAAAA (658) 103.4 0.1034 ONL TGTGTGTGTG (115) 23 0.023