| Library | Tag (Other Genes) | Normalized Count | % in library |
| P8 Cb GC | GCCCGCCAGG GTGGAAGAGA (2)
| 3.2 | 0.0032 |
| Cb medulloblastoma | GCCCGCCAGG
| 4.6 | 0.0046 |
| P8 GC+1d culture | CCCCAGGGAT GCCTGGAGAA TCTCCATCAC
| 3.3 | 0.0033 |
| P8 GC+SHH+1d culture | TCTCCATCAC
| 1.2 | 0.0012 |
| 3T3 fibroblasts | CCCCAGGGAT GCCCGCCAGG GCCTGGAGAA
| 10.5 | 0.0105 |
| E15 cortex | GCCCGCCAGG GCCTGGAGAA
| 29.6 | 0.0296 |
| P1 cortex | TCTCCATCAC
| 4.5 | 0.0045 |
| Hypothalamus | CCCCAGGGAT GCCCGCCAGG TCTCCATCAC
| 10.8 | 0.0108 |
| E12.5 retina | GCCCGCCAGG TCTCCATCAC
| 3.8 | 0.0038 |
| E14.5 retina | GCCCGCCAGG GCCTGGAGAA TCTCCATCAC
| 7.2 | 0.0072 |
| E18.5 retina | GAAGCTGTCT (2) GCCCGCCAGG TCTCCATCAC
| 10.9 | 0.0109 |
| P0.5 retina | CTGACCTTCT (2) TCTCCATCAC
| 5.9 | 0.0059 |
| P2.5 retina | GAAGCTGTCT (2) GCCCGCCAGG GCCTGGAGAA
| 7.1 | 0.0071 |
| P4.5 retina | GCCCGCCAGG
| 4 | 0.004 |
| P6.5 retina | GCCCGCCAGG GCCTGGAGAA GTGGAAGAGA (2)
| 5.1 | 0.0051 |
| P10.5 crx- retina | TCTCCATCAC
| 1.9 | 0.0019 |
| P10.5 crx+ retina | GCCCGCCAGG
| 1.9 | 0.0019 |
| Adult retinal | GAAGCTGTCT (2)
| 1.9 | 0.0019 |
| ONL | CCCCAGGGAT CTGACCTTCT (2) GTGGAAGAGA (2)
| 5.7 | 0.0057 |