Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.253374	5830427D02Rik	RIKEN cDNA 5830427D02 gene	15		76042
Mm.253374	9430065F09Rik	RIKEN cDNA 9430065F09 gene	15		77354
Mm.253374	Atf7	activating transcription factor 7	15		223922
Gene Ontology	ATP binding | DNA binding | hydrogen transport | hydrogen-exporting ATPase activity, phosphorylative mechanism | nucleus | regulation of transcription, DNA-dependent | transcription factor activity
Human Homolog	ATF7[activating transcription factor 7]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 29 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC GAAGAGGTGG (9) 3.3 0.0033 Cb medulloblastoma AATTTTGTTT (5) 6.9 0.0069 Cb medulloblastoma GAAGAGGTGG (9) 2.3 0.0023 P8 GC+1d culture AATTTTGTTT (5) 2.3 0.0023 P8 GC+1d culture GAAGAGGTGG (9) 1.1 0.0011 P8 GC+1d culture TCTCTGCCTT (4) 1.1 0.0011 P8 GC+SHH+1d culture GAAGAGGTGG (9) 3.5 0.0035 P8 GC+SHH+1d culture TGCTTTATTC (3) 2.3 0.0023 P8 GC+SHH+1d culture TCTCTGCCTT (4) 1.2 0.0012 E15 cortex GCTGCTTCCT (11) 4.9 0.0049 E15 cortex TGCTTTATTC (3) 4.9 0.0049 Hypothalamus GAAGAGGTGG (9) 16.3 0.0163 Hypothalamus AATTTTGTTT (5) 1.8 0.0018 E12.5 retina GAAGAGGTGG (9) 3.8 0.0038 E12.5 retina AATTTTGTTT (5) 1.9 0.0019 E12.5 retina GCTGCTTCCT (11) 1.9 0.0019 E14.5 retina AATTTTGTTT (5) 3.6 0.0036 E14.5 retina GAAGAGGTGG (9) 3.6 0.0036 E16.5 retina GAAGAGGTGG (9) 1.8 0.0018 P0.5 retina GAAGAGGTGG (9) 3.9 0.0039 P0.5 retina AATTTTGTTT (5) 2 0.002 P0.5 retina TGCTTTATTC (3) 2 0.002 P6.5 retina AATTTTGTTT (5) 5 0.005 P10.5 crx- retina AATTTTGTTT (5) 5.6 0.0056 P10.5 crx- retina GAAGAGGTGG (9) 1.9 0.0019 P10.5 crx+ retina AATTTTGTTT (5) 1.9 0.0019 P10.5 crx+ retina GCTGCTTCCT (11) 1.9 0.0019 P10.5 crx+ retina TCTCTGCCTT (4) 1.9 0.0019 ONL AATTTTGTTT (5) 1.9 0.0019