Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.253446
9430097H08Rik
RIKEN cDNA 9430097H08 gene
6
264134
Mm.253446
9330141E21Rik
RIKEN cDNA 9330141E21 gene
6
319881
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 61 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
CCTTTAATCT (
38
)
4.9
0.0049
P8 Cb GC
GTGGCACACG (
29
)
4.9
0.0049
P8 Cb GC
TGGCCCTCTG (
8
)
1.6
0.0016
Cb medulloblastoma
TGGCCCTCTG (
8
)
11.6
0.0116
Cb medulloblastoma
GTGGCACACG (
29
)
2.3
0.0023
P8 GC+1d culture
TGGCCCTCTG (
8
)
8
0.008
P8 GC+1d culture
AGGGCTTGTT (
3
)
1.1
0.0011
P8 GC+1d culture
CCTTTAATCT (
38
)
1.1
0.0011
P8 GC+1d culture
GTGGCACACG (
29
)
1.1
0.0011
P8 GC+SHH+1d culture
GTGGCACACG (
29
)
7
0.007
P8 GC+SHH+1d culture
CCTTTAATCT (
38
)
3.5
0.0035
P8 GC+SHH+1d culture
TGGCCCTCTG (
8
)
2.3
0.0023
3T3 fibroblasts
GTGGCACACG (
29
)
35
0.035
3T3 fibroblasts
CCTTTAATCT (
38
)
10.5
0.0105
E15 cortex
GTGGCACACG (
29
)
69.3
0.0693
E15 cortex
TGGCCCTCTG (
8
)
4.9
0.0049
P1 cortex
TGGCCCTCTG (
8
)
13.6
0.0136
P1 cortex
GTGGCACACG (
29
)
9.1
0.0091
P1 cortex
AGGGCTTGTT (
3
)
4.5
0.0045
P1 cortex
CCTTTAATCT (
38
)
4.5
0.0045
Hypothalamus
TGGCCCTCTG (
8
)
16.3
0.0163
Hypothalamus
AGGGCTTGTT (
3
)
1.8
0.0018
Hypothalamus
CCTTTAATCT (
38
)
1.8
0.0018
E12.5 retina
GTGGCACACG (
29
)
13.1
0.0131
E12.5 retina
AAGGCTTGTT
(
6
)
1.9
0.0019
E12.5 retina
CCTTTAATCT (
38
)
1.9
0.0019
E12.5 retina
TGGCCCTCTG (
8
)
1.9
0.0019
E14.5 retina
GTGGCACACG (
29
)
18.2
0.0182
E14.5 retina
CCTTTAATCT (
38
)
12.8
0.0128
E16.5 retina
GTGGCACACG (
29
)
5.4
0.0054
E18.5 retina
TGGCCCTCTG (
8
)
10.9
0.0109
E18.5 retina
GTGGCACACG (
29
)
3.6
0.0036
E18.5 retina
ATATAAAACA
(
4
)
1.8
0.0018
P0.5 retina
GTGGCACACG (
29
)
5.9
0.0059
P0.5 retina
TGGCCCTCTG (
8
)
3.9
0.0039
P0.5 retina
CCTTTAATCT (
38
)
2
0.002
P2.5 retina
GTGGCACACG (
29
)
8.8
0.0088
P2.5 retina
CCTTTAATCT (
38
)
3.5
0.0035
P2.5 retina
TGGCCCTCTG (
8
)
1.8
0.0018
P4.5 retina
GTGGCACACG (
29
)
13.9
0.0139
P4.5 retina
TGGCCCTCTG (
8
)
7.9
0.0079
P4.5 retina
CCTTTAATCT (
38
)
4
0.004
P6.5 retina
CCTTTAATCT (
38
)
11.7
0.0117
P6.5 retina
TGGCCCTCTG (
8
)
8.3
0.0083
P6.5 retina
GTGGCACACG (
29
)
6.7
0.0067
P10.5 crx- retina
TGGCCCTCTG (
8
)
5.6
0.0056
P10.5 crx- retina
AAGGCTTGTT
(
6
)
1.9
0.0019
P10.5 crx- retina
GTGGCACACG (
29
)
1.9
0.0019
P10.5 crx+ retina
GTGGCACACG (
29
)
9.6
0.0096
P10.5 crx+ retina
TGGCCCTCTG (
8
)
9.6
0.0096
P10.5 crx+ retina
AAGGCTTGTT
(
6
)
1.9
0.0019
P10.5 crx+ retina
ATATAAAACA
(
4
)
1.9
0.0019
Adult retinal
GTGGCACACG (
29
)
13
0.013
Adult retinal
CCTTTAATCT (
38
)
7.4
0.0074
Adult retinal
ATATAAAACA
(
4
)
1.9
0.0019
Adult retinal
TGGCCCTCTG (
8
)
1.9
0.0019
ONL
CCTTTAATCT (
38
)
11.5
0.0115
ONL
GTGGCACACG (
29
)
7.7
0.0077
ONL
AAGGCTTGTT
(
6
)
1.9
0.0019
ONL
ATATAAAACA
(
4
)
1.9
0.0019
ONL
TGGCCCTCTG (
8
)
1.9
0.0019
