Mouse Retina SAGE Library

[Home]    [Libraries]    [Images]

---

Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

---

UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254134	Gpiap1	GPI-anchored membrane protein 1	2		53872
Human Homolog	M11S1[membrane component, chromosome 11, surface marker 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 196 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAAAAAAAGG ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) CATTGCTAGT GAGCATACTT GCCTCGGTCT (2) GCTCCCTCTG TAAATTTGCT TTTCTAAAAA (2) TTTTCTCCTG 47.1 0.0471 Cb medulloblastoma ACAGTGCCTG (3) GCTCCCTCTG GGGGGGGGGG TAAATTTGCT TTTCTAAAAA (2) TTTTTCTACA 29.9 0.0299 P8 GC+1d culture ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) CATTGCTAGT GAGAAATAAT GAGCATACTT GCTCCCTCTG GGGGGGGGGG TAAATTTGCT TAATAAATAT (3) TTTCTAAAAA (2) TTTTTCTACA 59.2 0.0592 P8 GC+SHH+1d culture AAAAAAAAGG ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) GACTGGAATG GAGAAATAAT GAGCATACTT GCTCCCTCTG GGGGGGGGGG TAAATTTGCT TAATAAATAT (3) TAATAAATTA (2) TTTAGTTTTT (2) TTTCTAAAAA (2) TTTTTCTACA 64.4 0.0644 3T3 fibroblasts ACAGTGCCTG (3) AGTTTAAGGG (2) GCTCCCTCTG GGGGGGGGGG TTCTGTCCTA 17.5 0.0175 E15 cortex ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) GCTCCCTCTG GGGGGGGGGG 49.3 0.0493 P1 cortex ACAGTGCCTG (3) AGTTTAAGGG (2) CGGGAAATAC GAGAAAATAA (2) GAGCATACTT GCTCCCTCTG TAATAAATTA (2) TTTCTAAAAA (2) 49.7 0.0497 Hypothalamus AAATGCTACC ACAGTGCCTG (3) CATTGCTAGT GACTGGAATG GCTCCCTCTG GGGGGGGGGG TAAATTTGCT TAATAAATTA (2) TTTTCTCCTG TTTTTCTACA 47 0.047 E12.5 retina ACAGTGCCTG (3) AGTTTAAGGG (2) CGGGAAATAC GAGAAATAAT GCCTCGGTCT (2) GCTCCCTCTG TTTAGTTTTT (2) TTTCTAAAAA (2) TTTCTAAAAG TTTTCTCCTG TTTTTATTTG (2) 62.2 0.0622 E14.5 retina AAATGCTACC ACAGTGCCTG (3) ACCTTCCAAT GAGAAAATAA (2) GAGAAATAAT GAGCTCACAT GCTCCCTCTG TAAATTTGCT TAATAAATAT (3) TTCTGTCCTA TTTCTAAAAA (2) TTTCTAAAAG 63.5 0.0635 E16.5 retina ACAGTGCCTG (3) GAGAAATAAT GAGCATACTT GCTCCCTCTG TAATAAATAT (3) TTTAGTTTTT (2) TTTTTATTTG (2) 47.1 0.0471 E18.5 retina AAAAAAAAGG ACAGTGCCTG (3) AGTTTAAGGG (2) GAGAAATAAT GAGCTCACAT GCCTCGGTCT (2) GCTCCCTCTG TAAATTTGCT TAATAAATTA (2) TTTCTAAAAA (2) TTTCTAAAAG TTTTTCTACA 65.3 0.0653 P0.5 retina ACAGTGCCTG (3) AGTTTAAGGG (2) GAGAAATAAT GAGCATACTT GCTCCCTCTG TAAATTTGCT TTCTGTCCTA TTTCTAAAAG TTTTTCTACA 45.3 0.0453 P2.5 retina ACAGTGCCTG (3) AGTTTAAGGG (2) GAGAAATAAT GCCTCGGTCT (2) GCTCCCTCTG GGGGGGGGGG TAAATTTGCT TTTCTAAAAA (2) TTTTTCTACA 56.4 0.0564 P4.5 retina ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) GAGAAAATAA (2) GAGAAATAAT GCTCCCTCTG GGGGGGGGGG TTTCTAAAAA (2) TTTCTAAAAG TTTTTCTACA 87.3 0.0873 P6.5 retina AAAAAAAAGG ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) GAGAAAATAA (2) GAGCATACTT GAGCTCACAT GCTCCCTCTG GGGGGGGGGG TTCTGTCCTA TTTAGTTTTT (2) TTTCTAAAAA (2) TTTTTATTTG (2) 81.9 0.0819 P10.5 crx- retina ACAGTGCCTG (3) AGTTTAAGGG (2) GACAGAAACA (2) GACTGGAATG GAGAAAATAA (2) GAGCATACTT GCTCCCTCTG TTCTGTCCTA TTTTTCTACA 31.8 0.0318 P10.5 crx+ retina AAATGCTACC ACAGTGCCTG (3) AGTTTAAGGG (2) CATTGCTAGT GACAGAAACA (2) GAGAAAATAA (2) GAGAAATAAT GAGCATACTT GAGCTCACAT GCTCCCTCTG GGGGGGGGGG TAATAAATAT (3) 72.8 0.0728 Adult retinal ACAGTGCCTG (3) AGTTTAAGGG (2) GACTGGAATG GAGAAATAAT GAGCATACTT GCTCCCTCTG GGGGGGGGGG TTTCTAAAAA (2) 20.6 0.0206 ONL ACAGTGCCTG (3) ACCTTCCAAT AGTTTAAGGG (2) GACAGAAACA (2) GACTGGAATG GAGCATACTT GCTCCCTCTG GGGGGGGGGG TAAATGCTCT (3) TAAATTTGCT TTTCTAAAAG TTTTCTCCTG 32.4 0.0324