Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.254336	Ophn1	oligophrenin 1	X		94190
Gene Ontology	actin binding | actin cytoskeleton | actin cytoskeleton organization and biogenesis | GTPase activator activity
Human Homolog	OPHN1[oligophrenin 1]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 40 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TTTTTTTTTT (433) 4.9 0.0049 P8 Cb GC TCTTAAAAAA (9) 1.6 0.0016 Cb medulloblastoma AAGTGGGGTT 2.3 0.0023 Cb medulloblastoma GTCTTTTATC 2.3 0.0023 Cb medulloblastoma TTTTTTTTTT (433) 2.3 0.0023 P8 GC+1d culture TTTTTTTTTT (433) 13.7 0.0137 P8 GC+1d culture TCAAAGCCTA (2) 3.4 0.0034 P8 GC+1d culture GTCTTTTATC 1.1 0.0011 P8 GC+SHH+1d culture TTTTTTTTTT (433) 5.9 0.0059 E15 cortex TTTTTTTTTT (433) 4.9 0.0049 P1 cortex TCAAAGCCTA (2) 4.5 0.0045 P1 cortex TTTTTTTTTT (433) 4.5 0.0045 Hypothalamus TTTTTTTTTT (433) 7.2 0.0072 Hypothalamus AAGTGGGGTT 1.8 0.0018 Hypothalamus GTCTTTTATC 1.8 0.0018 E12.5 retina TTTTTTTTTT (433) 7.5 0.0075 E14.5 retina TTTTTTTTTT (433) 23.7 0.0237 E14.5 retina TCAAAGCCTA (2) 1.8 0.0018 E16.5 retina TTTTTTTTTT (433) 5.4 0.0054 E16.5 retina TCAAAGCCTA (2) 1.8 0.0018 E18.5 retina TTTTTTTTTT (433) 10.9 0.0109 E18.5 retina TCAAAGCCTA (2) 1.8 0.0018 E18.5 retina TCTTAAAAAA (9) 1.8 0.0018 P0.5 retina TTTTTTTTTT (433) 9.8 0.0098 P0.5 retina GTCTTTTATC 2 0.002 P2.5 retina TTTTTTTTTT (433) 7 0.007 P2.5 retina TCAAAGCCTA (2) 3.5 0.0035 P2.5 retina TCTTAAAAAA (9) 3.5 0.0035 P4.5 retina TTTTTTTTTT (433) 9.9 0.0099 P4.5 retina TCTTAAAAAA (9) 2 0.002 P6.5 retina TTTTTTTTTT (433) 8.3 0.0083 P6.5 retina TCAAAGCCTA (2) 1.7 0.0017 P6.5 retina TCTTAAAAAA (9) 1.7 0.0017 P10.5 crx- retina TCAAAGCCTA (2) 3.7 0.0037 P10.5 crx+ retina TTTTTTTTTT (433) 3.8 0.0038 Adult retinal TTTTTTTTTT (433) 7.4 0.0074 Adult retinal AAGTGGGGTT 1.9 0.0019 Adult retinal TCTTAAAAAA (9) 1.9 0.0019 ONL TTTTTTTTTT (433) 3.8 0.0038 ONL TCTTAAAAAA (9) 1.9 0.0019