Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.254784
Klhdc3
kelch domain containing 3
17
17 24.31 cM
71765
Gene Ontology
cytoplasm
|
nuclear chromatin
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 82 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
TACATTTTTG
(
3
)
6.5
0.0065
P8 Cb GC
AAACCCCCTC
(
4
)
3.3
0.0033
P8 Cb GC
CTGCAGCTGG (
7
)
1.6
0.0016
P8 Cb GC
GCTAGGAAGT
(
3
)
1.6
0.0016
Cb medulloblastoma
AAACCCCCTC
(
4
)
4.6
0.0046
Cb medulloblastoma
CTGCAGCTGG (
7
)
4.6
0.0046
P8 GC+1d culture
TTACATCTTT (
3
)
19.4
0.0194
P8 GC+1d culture
AAACCCCCTC
(
4
)
17.1
0.0171
P8 GC+1d culture
TACATTTTTG
(
3
)
6.8
0.0068
P8 GC+1d culture
GCTAGGAAGT
(
3
)
1.1
0.0011
P8 GC+1d culture
TGCACATTTT (
3
)
1.1
0.0011
P8 GC+1d culture
TTCATTTGGG (
7
)
1.1
0.0011
P8 GC+SHH+1d culture
AAACCCCCTC
(
4
)
14.1
0.0141
P8 GC+SHH+1d culture
TTACATCTTT (
3
)
11.7
0.0117
P8 GC+SHH+1d culture
TACATTTTTG
(
3
)
3.5
0.0035
3T3 fibroblasts
GAGCTTCCCT
3.5
0.0035
E15 cortex
ACCACCCTCT (
7
)
9.9
0.0099
E15 cortex
ATCAGTGACA (
6
)
4.9
0.0049
P1 cortex
AAACCCCCTC
(
4
)
4.5
0.0045
P1 cortex
TTACATCTTT (
3
)
4.5
0.0045
P1 cortex
TTCATTTGGG (
7
)
4.5
0.0045
Hypothalamus
GCTAGGAAGT
(
3
)
3.6
0.0036
Hypothalamus
ACCTCTGGAA
(
2
)
1.8
0.0018
E12.5 retina
AAACCCCCTC
(
4
)
11.3
0.0113
E12.5 retina
ACCTCTGGAA
(
2
)
3.8
0.0038
E12.5 retina
TACATTTTTG
(
3
)
3.8
0.0038
E12.5 retina
ATCAGTGACA (
6
)
1.9
0.0019
E12.5 retina
TTCATTTGGG (
7
)
1.9
0.0019
E14.5 retina
AAACCCCCTC
(
4
)
5.5
0.0055
E14.5 retina
ACCTCTGGAA
(
2
)
5.5
0.0055
E14.5 retina
TACATTTTTG
(
3
)
3.6
0.0036
E14.5 retina
TATGTCTTTG
(
3
)
1.8
0.0018
E16.5 retina
AAACCCCCTC
(
4
)
9.1
0.0091
E16.5 retina
TACATTTTTG
(
3
)
9.1
0.0091
E16.5 retina
ATCAGTGACA (
6
)
3.6
0.0036
E16.5 retina
ACCACCCTCT (
7
)
1.8
0.0018
E16.5 retina
ACCTCTGGAA
(
2
)
1.8
0.0018
E16.5 retina
TGCACATTCT
1.8
0.0018
E16.5 retina
TTCATTTGGG (
7
)
1.8
0.0018
E18.5 retina
TACATTTTTG
(
3
)
12.7
0.0127
E18.5 retina
AAACCCCCTC
(
4
)
7.3
0.0073
E18.5 retina
ACCTCTGGAA
(
2
)
1.8
0.0018
E18.5 retina
GAGCTTCCCT
1.8
0.0018
P0.5 retina
AAACCCCCTC
(
4
)
5.9
0.0059
P0.5 retina
TACATTTTTG
(
3
)
3.9
0.0039
P0.5 retina
ACCTCTGGAA
(
2
)
2
0.002
P0.5 retina
CTGCAGCTGG (
7
)
2
0.002
P0.5 retina
TATGTCTTTG
(
3
)
2
0.002
P0.5 retina
TGCACATTCT
2
0.002
P0.5 retina
TGCACATTTT (
3
)
2
0.002
P2.5 retina
AAACCCCCTC
(
4
)
14.1
0.0141
P2.5 retina
GAGCTTCCCT
1.8
0.0018
P2.5 retina
TACATTTTTG
(
3
)
1.8
0.0018
P2.5 retina
TGCACATTCT
1.8
0.0018
P2.5 retina
TTACATCTTT (
3
)
1.8
0.0018
P4.5 retina
AAACCCCCTC
(
4
)
5.9
0.0059
P4.5 retina
TACATTTTTG
(
3
)
4
0.004
P4.5 retina
TTACATCTTT (
3
)
4
0.004
P4.5 retina
TTCATTTGGG (
7
)
2
0.002
P6.5 retina
AAACCCCCTC
(
4
)
3.3
0.0033
P6.5 retina
TACATTTTTG
(
3
)
3.3
0.0033
P6.5 retina
TTCATTTGGG (
7
)
3.3
0.0033
P6.5 retina
ACCTCTGGAA
(
2
)
1.7
0.0017
P6.5 retina
TATGTCTTTG
(
3
)
1.7
0.0017
P6.5 retina
TTACATCTTT (
3
)
1.7
0.0017
P10.5 crx- retina
AAACCCCCTC
(
4
)
9.3
0.0093
P10.5 crx- retina
TACATTTTTG
(
3
)
3.7
0.0037
P10.5 crx- retina
CTGCAGCTGG (
7
)
1.9
0.0019
P10.5 crx- retina
TTCATTTGGG (
7
)
1.9
0.0019
P10.5 crx+ retina
TACATTTTTG
(
3
)
3.8
0.0038
P10.5 crx+ retina
AAACCCCCTC
(
4
)
1.9
0.0019
P10.5 crx+ retina
ATCAGTGACA (
6
)
1.9
0.0019
P10.5 crx+ retina
CTGCAGCTGG (
7
)
1.9
0.0019
Adult retinal
AAACCCCCTC
(
4
)
9.3
0.0093
Adult retinal
CTGCAGCTGG (
7
)
3.7
0.0037
Adult retinal
TATGTCTTTG
(
3
)
1.9
0.0019
Adult retinal
TGCACATTTT (
3
)
1.9
0.0019
ONL
ACCTCTGGAA
(
2
)
17.2
0.0172
ONL
AAACCCCCTC
(
4
)
5.7
0.0057
ONL
TACATTTTTG
(
3
)
5.7
0.0057
ONL
TGCACATTTT (
3
)
1.9
0.0019
ONL
TTCATTTGGG (
7
)
1.9
0.0019
