Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.255075	Stk38	serine/threonine kinase 38	17		106504
Gene Ontology	ATP binding | kinase activity | protein serine/threonine kinase activity | transferase activity
Human Homolog	STK38[serine/threonine kinase 38]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 89 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC TGGTTGCTGG (369) 68.5 0.0685 P8 Cb GC GGAGAATAAG 3.3 0.0033 Cb medulloblastoma TGGTTGCTGG (369) 113.3 0.1133 Cb medulloblastoma GCTGCTGCCA (7) 4.6 0.0046 Cb medulloblastoma GTGGTGCACA (18) 4.6 0.0046 Cb medulloblastoma TCTTTGATGA (5) 2.3 0.0023 P8 GC+1d culture TGGTTGCTGG (369) 57.1 0.0571 P8 GC+1d culture GGAGAATAAG 4.6 0.0046 P8 GC+1d culture GTGGTGCACA (18) 1.1 0.0011 P8 GC+1d culture TCTAGATGAG (6) 1.1 0.0011 P8 GC+1d culture TCTTTGATGA (5) 1.1 0.0011 P8 GC+SHH+1d culture TGGTTGCTGG (369) 89 0.089 P8 GC+SHH+1d culture GGAGAATAAG 7 0.007 P8 GC+SHH+1d culture GTGGTGCACA (18) 4.7 0.0047 3T3 fibroblasts TGGTTGCTGG (369) 220.8 0.2208 3T3 fibroblasts GCTGCTGCCA (7) 35 0.035 3T3 fibroblasts GTGGTGCACA (18) 14 0.014 E15 cortex TGGTTGCTGG (369) 277.1 0.2771 E15 cortex GTGGTGCACA (18) 24.7 0.0247 E15 cortex GGAGAATAAG 4.9 0.0049 P1 cortex TGGTTGCTGG (369) 86.4 0.0864 P1 cortex GTGGTGCACA (18) 13.6 0.0136 P1 cortex ATGACTTTAT (2) 4.5 0.0045 Hypothalamus TGGTTGCTGG (369) 349.6 0.3496 Hypothalamus GTGGTGCACA (18) 3.6 0.0036 Hypothalamus GCTGCTGCCA (7) 1.8 0.0018 Hypothalamus GGAGAATAAG 1.8 0.0018 Hypothalamus TCTAGATGAG (6) 1.8 0.0018 E12.5 retina TGGTTGCTGG (369) 157.7 0.1577 E12.5 retina GCTGCTGCCA (7) 5.6 0.0056 E12.5 retina GGAGAATAAG 5.6 0.0056 E12.5 retina GTGGTGCACA (18) 3.8 0.0038 E12.5 retina TCTAGATGAG (6) 1.9 0.0019 E14.5 retina TGGTTGCTGG (369) 936.5 0.9365 E14.5 retina GGAGAATAAG 18.2 0.0182 E14.5 retina GTGGTGCACA (18) 7.3 0.0073 E14.5 retina GCTGCTGCCA (7) 1.8 0.0018 E16.5 retina TGGTTGCTGG (369) 767.9 0.7679 E16.5 retina GGAGAATAAG 7.2 0.0072 E16.5 retina GTGGTGCACA (18) 3.6 0.0036 E16.5 retina GATCAAGCAC (2) 1.8 0.0018 E16.5 retina GCTGCTGCCA (7) 1.8 0.0018 E16.5 retina TCTAGATGAG (6) 1.8 0.0018 E18.5 retina TGGTTGCTGG (369) 252.8 0.2528 E18.5 retina GGAGAATAAG 5.5 0.0055 E18.5 retina GCTGCTGCCA (7) 3.6 0.0036 E18.5 retina GTGGTGCACA (18) 3.6 0.0036 P0.5 retina TGGTTGCTGG (369) 190.4 0.1904 P0.5 retina CTCACCACAC (4) 3.9 0.0039 P0.5 retina GATCAAGCAC (2) 3.9 0.0039 P0.5 retina GTGGTGCACA (18) 3.9 0.0039 P0.5 retina ATGACTTTAT (2) 2 0.002 P0.5 retina GGAGAATAAG 2 0.002 P2.5 retina TGGTTGCTGG (369) 165.4 0.1654 P2.5 retina GGAGAATAAG 7 0.007 P2.5 retina GTGGTGCACA (18) 7 0.007 P2.5 retina GCTGCTGCCA (7) 3.5 0.0035 P4.5 retina TGGTTGCTGG (369) 150.6 0.1506 P4.5 retina GGAGAATAAG 5.9 0.0059 P4.5 retina GTGGTGCACA (18) 4 0.004 P4.5 retina ATGACTTTAT (2) 2 0.002 P4.5 retina CTCACCACAC (4) 2 0.002 P4.5 retina TCTAGATGAG (6) 2 0.002 P4.5 retina TGTCTTTTGT (3) 2 0.002 P6.5 retina TGGTTGCTGG (369) 156.7 0.1567 P6.5 retina GTGGTGCACA (18) 5 0.005 P6.5 retina TGTCTTTTGT (3) 5 0.005 P6.5 retina ATGACTTTAT (2) 1.7 0.0017 P6.5 retina TCTAGATGAG (6) 1.7 0.0017 P10.5 crx- retina TGGTTGCTGG (369) 280.5 0.2805 P10.5 crx- retina GATCAAGCAC (2) 13 0.013 P10.5 crx- retina GGAGAATAAG 5.6 0.0056 P10.5 crx- retina TGTCTTTTGT (3) 1.9 0.0019 P10.5 crx+ retina TGGTTGCTGG (369) 101.9 0.1019 P10.5 crx+ retina GTGGTGCACA (18) 5.8 0.0058 P10.5 crx+ retina GGAGAATAAG 3.8 0.0038 P10.5 crx+ retina GCTGCTGCCA (7) 1.9 0.0019 P10.5 crx+ retina TCTAGATGAG (6) 1.9 0.0019 Adult retinal TGGTTGCTGG (369) 214.8 0.2148 Adult retinal GTGGTGCACA (18) 9.3 0.0093 Adult retinal GGAGAATAAG 3.7 0.0037 Adult retinal TGTCTTTTGT (3) 3.7 0.0037 Adult retinal GCTGCTGCCA (7) 1.9 0.0019 ONL TGGTTGCTGG (369) 398.4 0.3984 ONL GTGGTGCACA (18) 11.5 0.0115 ONL ATGACTTTAT (2) 1.9 0.0019 ONL GGAGAATAAG 1.9 0.0019 ONL TCTAGATGAG (6) 1.9 0.0019 ONL TCTTTGATGA (5) 1.9 0.0019