Mouse Retina SAGE Library

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Gene:              Accession:     e.g., Rho or Rhodopsin e.g., BG297543 batch search Tag:        Cytoband (Mm):     e.g., CCCAGTTCAC e.g., 6 E3 Unigene:        Cytoband (Hs):     e.g., Mm.2965 batch search e.g., 3q21-q24

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UniGene	Symbol	Name	Chr	Cytoband	LocusLink
Mm.2551	4930564D15Rik	RIKEN cDNA 4930564D15 gene	3		75365
Mm.2551	Sec22l1	SEC22 vesicle trafficking protein-like 1 (S. cerevisiae)	3		20333
Gene Ontology	endoplasmic reticulum | endoplasmic reticulum membrane | ER to Golgi transport | Golgi apparatus | Golgi membrane | integral to membrane | protein transport | transport | vesicle-mediated transport
Human Homolog	SEC22L1[SEC22 vesicle trafficking protein-like 1 (S. cerevisiae)]
Clusters	All Libraries - Raw DataAll Libraries - NormalizedComplete Retina - Raw DataComplete Retina - NormalizedEarly Retina - Raw DataEarly Retina - NormalizedLate Retina - Raw DataLate Retina - Normalized   Neighbors

No In Situ Hybridization images could be found.



SAGE Tags

Total 59 tags found with positive counts.

all tags     reliable tags     sum by library with all tags     sum by library with reliable tags    Library   Tag (Other Genes)   Normalized Count   % in library  P8 Cb GC AAATACAAAA (5) 1.6 0.0016 P8 Cb GC AGTTCCAGGA (11) 1.6 0.0016 P8 Cb GC ATGCACAGAT (5) 1.6 0.0016 P8 Cb GC CTGCAACTTA (2) 1.6 0.0016 Cb medulloblastoma CTGCAACTTA (2) 6.9 0.0069 Cb medulloblastoma AAATACAAAA (5) 2.3 0.0023 Cb medulloblastoma ATGCACAGAT (5) 2.3 0.0023 P8 GC+1d culture ATGCACAGAT (5) 4.6 0.0046 P8 GC+1d culture CTGCAACTTA (2) 3.4 0.0034 P8 GC+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+1d culture TGTGTATGTG (9) 1.1 0.0011 P8 GC+SHH+1d culture AGTTCCAGGA (11) 2.3 0.0023 P8 GC+SHH+1d culture ATGCACAGAT (5) 2.3 0.0023 P8 GC+SHH+1d culture CTGCAACTTA (2) 1.2 0.0012 3T3 fibroblasts AACCAGGCTG (7) 3.5 0.0035 P1 cortex ATGCACAGAT (5) 4.5 0.0045 Hypothalamus CTGCAACTTA (2) 5.4 0.0054 E12.5 retina CTGCAACTTA (2) 3.8 0.0038 E12.5 retina AAATACAAAA (5) 1.9 0.0019 E12.5 retina AGTTCCAGGA (11) 1.9 0.0019 E14.5 retina CTGCAACTTA (2) 7.3 0.0073 E14.5 retina AGTTCCAGGA (11) 1.8 0.0018 E14.5 retina ATGCACAGAT (5) 1.8 0.0018 E16.5 retina CTGCAACTTA (2) 5.4 0.0054 E16.5 retina AAATACAAAA (5) 1.8 0.0018 E18.5 retina AGTTCCAGGA (11) 3.6 0.0036 E18.5 retina ATGCACAGAT (5) 3.6 0.0036 P0.5 retina AGTTCCAGGA (11) 2 0.002 P0.5 retina ATGCACAGAT (5) 2 0.002 P0.5 retina CTGCAACTTA (2) 2 0.002 P2.5 retina ATGCACAGAT (5) 5.3 0.0053 P2.5 retina AGTTCCAGGA (11) 1.8 0.0018 P2.5 retina CTGCAACTTA (2) 1.8 0.0018 P4.5 retina AGTTCCAGGA (11) 7.9 0.0079 P4.5 retina CTGCAACTTA (2) 5.9 0.0059 P4.5 retina ATGCACAGAT (5) 4 0.004 P4.5 retina AAATACAAAA (5) 2 0.002 P6.5 retina CTGCAACTTA (2) 15 0.015 P6.5 retina ATGCACAGAT (5) 5 0.005 P6.5 retina AGTTCCAGGA (11) 3.3 0.0033 P6.5 retina TGTGTATGTG (9) 1.7 0.0017 P10.5 crx- retina CTGCAACTTA (2) 9.3 0.0093 P10.5 crx- retina ATGCACAGAT (5) 5.6 0.0056 P10.5 crx- retina AACCAGGCTG (7) 1.9 0.0019 P10.5 crx- retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx+ retina ATGCACAGAT (5) 9.6 0.0096 P10.5 crx+ retina CTGCAACTTA (2) 3.8 0.0038 P10.5 crx+ retina AGTTCCAGGA (11) 1.9 0.0019 P10.5 crx+ retina TGTGTATGTG (9) 1.9 0.0019 Adult retinal ATGCACAGAT (5) 11.1 0.0111 Adult retinal TGTGTATGTG (9) 3.7 0.0037 Adult retinal AAATACAAAA (5) 1.9 0.0019 Adult retinal AGTTCCAGGA (11) 1.9 0.0019 Adult retinal CTGCAACTTA (2) 1.9 0.0019 ONL AGTTCCAGGA (11) 9.6 0.0096 ONL CTGCAACTTA (2) 3.8 0.0038 ONL AACCAGGCTG (7) 1.9 0.0019 ONL ATGCACAGAT (5) 1.9 0.0019 ONL TGTGTATGTG (9) 1.9 0.0019