Mouse Retina SAGE Library
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Gene:
Accession:
e.g., Rho or Rhodopsin
e.g., BG297543
batch search
Tag:
Cytoband (Mm):
e.g., CCCAGTTCAC
e.g., 6 E3
Unigene:
Cytoband (Hs):
e.g., Mm.2965
batch search
e.g., 3q21-q24
UniGene
Symbol
Name
Chr
Cytoband
LocusLink
Mm.255858
Sh2bp1
SH2 domain binding protein 1 (tetratricopeptide repeat containing)
7
7 54.0 cM
22083
Mm.255858
AI785031
expressed sequence AI785031
7
101651
Clusters
All Libraries - Raw Data
All Libraries - Normalized
Complete Retina - Raw Data
Complete Retina - Normalized
Early Retina - Raw Data
Early Retina - Normalized
Late Retina - Raw Data
Late Retina - Normalized
Neighbors
No In Situ Hybridization images could be found.
SAGE Tags
Total 38 tags found with positive counts.
all tags
reliable tags
sum by library with all tags
sum by library with reliable tags
Library
Tag (Other Genes)
Normalized Count
% in library
P8 Cb GC
AAAAAAAAAA (
658
)
203.9
0.2039
P8 Cb GC
ATGAGGAAGA
(
8
)
3.3
0.0033
P8 Cb GC
TTTGCTGAGT
(
5
)
3.3
0.0033
Cb medulloblastoma
AAAAAAAAAA (
658
)
797.8
0.7978
P8 GC+1d culture
AAAAAAAAAA (
658
)
204.3
0.2043
P8 GC+1d culture
AGCAGAGTGC
(
4
)
2.3
0.0023
P8 GC+SHH+1d culture
AAAAAAAAAA (
658
)
278.7
0.2787
P8 GC+SHH+1d culture
TTTGCTGAGT
(
5
)
1.2
0.0012
3T3 fibroblasts
AAAAAAAAAA (
658
)
28
0.028
E15 cortex
AAAAAAAAAA (
658
)
212.8
0.2128
E15 cortex
AGCAGAGTGC
(
4
)
4.9
0.0049
E15 cortex
TTTGCTGAGT
(
5
)
4.9
0.0049
P1 cortex
AAAAAAAAAA (
658
)
245.4
0.2454
Hypothalamus
AAAAAAAAAA (
658
)
123.2
0.1232
Hypothalamus
AGCAGAGTGC
(
4
)
1.8
0.0018
Hypothalamus
ATGAGGAAGA
(
8
)
1.8
0.0018
E12.5 retina
AAAAAAAAAA (
658
)
138.9
0.1389
E14.5 retina
AAAAAAAAAA (
658
)
94.7
0.0947
E16.5 retina
AAAAAAAAAA (
658
)
43.5
0.0435
E18.5 retina
AAAAAAAAAA (
658
)
374.7
0.3747
P0.5 retina
AAAAAAAAAA (
658
)
117.8
0.1178
P0.5 retina
GGTTGGGAGG
(
2
)
2
0.002
P2.5 retina
AAAAAAAAAA (
658
)
329.1
0.3291
P2.5 retina
GGTTGGGAGG
(
2
)
1.8
0.0018
P4.5 retina
AAAAAAAAAA (
658
)
283.3
0.2833
P4.5 retina
AGCAGAGTGC
(
4
)
2
0.002
P4.5 retina
CTGCCTACCG
(
3
)
2
0.002
P6.5 retina
AAAAAAAAAA (
658
)
266.8
0.2668
P6.5 retina
GGTTGGGAGG
(
2
)
1.7
0.0017
P10.5 crx- retina
AAAAAAAAAA (
658
)
44.6
0.0446
P10.5 crx- retina
AGCAGAGTGC
(
4
)
1.9
0.0019
P10.5 crx+ retina
AAAAAAAAAA (
658
)
96.1
0.0961
P10.5 crx+ retina
CTGCCTACCG
(
3
)
3.8
0.0038
P10.5 crx+ retina
GGTTGGGAGG
(
2
)
1.9
0.0019
Adult retinal
AAAAAAAAAA (
658
)
57.4
0.0574
Adult retinal
AGCAGAGTGC
(
4
)
1.9
0.0019
Adult retinal
CTGCCTACCG
(
3
)
1.9
0.0019
ONL
AAAAAAAAAA (
658
)
103.4
0.1034
